Homologs in group_3852

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS11205 F4V73_RS11205 31.9 Morganella psychrotolerans - protein-tyrosine phosphatase family protein

Distribution of the homologs in the orthogroup group_3852

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3852

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15273 1.22e-14 78 25 15 320 1 yopH Tyrosine-protein phosphatase YopH Yersinia enterocolitica
P08538 2.58e-14 77 25 15 320 1 yopH Tyrosine-protein phosphatase YopH Yersinia pseudotuberculosis serotype I (strain IP32953)
P23469 1.18e-05 50 31 4 95 1 PTPRE Receptor-type tyrosine-protein phosphatase epsilon Homo sapiens
Q9W6V5 1.83e-05 50 37 1 74 2 PTPRJ Receptor-type tyrosine-protein phosphatase eta Gallus gallus
P70289 3.61e-05 49 32 2 76 1 Ptprv Receptor-type tyrosine-protein phosphatase V Mus musculus
Q12913 4.42e-05 49 35 2 90 1 PTPRJ Receptor-type tyrosine-protein phosphatase eta Homo sapiens
P35832 7.82e-05 48 33 3 93 2 Ptp99A Tyrosine-protein phosphatase 99A Drosophila melanogaster
P49446 7.84e-05 48 33 5 95 1 Ptpre Receptor-type tyrosine-protein phosphatase epsilon Mus musculus
B2GV87 8.34e-05 48 33 5 95 2 Ptpre Receptor-type tyrosine-protein phosphatase epsilon Rattus norvegicus
P32587 0.000113 47 32 5 107 3 pyp3 Tyrosine-protein phosphatase 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O14522 0.000219 47 33 5 124 1 PTPRT Receptor-type tyrosine-protein phosphatase T Homo sapiens
Q99M80 0.00022 47 33 5 124 1 Ptprt Receptor-type tyrosine-protein phosphatase T Mus musculus
Q64455 0.000247 47 35 2 90 1 Ptprj Receptor-type tyrosine-protein phosphatase eta Mus musculus
Q15262 0.000684 45 36 2 77 1 PTPRK Receptor-type tyrosine-protein phosphatase kappa Homo sapiens
P35822 0.000685 45 36 2 77 1 Ptprk Receptor-type tyrosine-protein phosphatase kappa Mus musculus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13350
Feature type CDS
Gene -
Product protein-tyrosine phosphatase family protein
Location 2960157 - 2961287 (strand: -1)
Length 1131 (nucleotides) / 376 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3852
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00102 Protein-tyrosine phosphatase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5599 Signal transduction mechanisms (T) T Protein tyrosine phosphatase

Protein Sequence

MIRIIPNVSAKINSIRNFLGIKDPTGNLNVSSVKNSSAIWYTKDLPEKKAPVLCMRQNINNVNNIQRLVSTEVLNKLYYNENSPQYDENNYQCVPNSRYRVRYCKKTLIESNGVLLPTNNVSVKNSPYTTIASQYPLNDKESLKHYFNMLFDNDIKTVYVLASNKDIKWDFSKPDSEYDKSNSKQKGFKYFREDFYSDNIESRHFNKWDFSRFKIKGKNGKFIENKNGDNEVLLNERSLDCKVYINKLTKKGCDEKKNIKFVHIYNWRDHTAIDATKLKNTIDLIGKELTINPTKENIAVHCLAGLGRTGEFIALMEMMKMIEAGNTKTKSLESILVHLRENRSREVLKRKSQVDELIKFAINHNIPLVNDNIEIK

Flanking regions ( +/- flanking 50bp)

TATAAAGTTAGGAGACTGTTATGTAAAACTAAGTTATAAAAGGGTGATATATGATAAGAATAATACCTAATGTAAGTGCAAAAATTAATAGCATAAGAAATTTTTTAGGAATAAAAGATCCCACGGGAAATCTTAATGTCAGTAGTGTTAAGAATAGTAGTGCTATATGGTATACAAAAGATTTACCTGAAAAAAAAGCACCTGTTCTCTGTATGCGACAAAATATCAATAATGTAAATAATATCCAAAGATTAGTATCTACAGAAGTTCTTAACAAATTATATTATAATGAAAACTCACCTCAATATGATGAAAATAATTATCAATGTGTACCTAATTCTAGATATAGAGTACGATATTGTAAAAAAACTTTAATAGAATCTAATGGGGTATTATTACCTACTAATAATGTGAGTGTTAAGAACTCTCCTTATACGACTATTGCAAGCCAATATCCTCTTAATGATAAAGAGAGTTTAAAACATTATTTTAATATGTTATTTGATAATGATATAAAGACAGTTTATGTTTTAGCCTCGAATAAGGATATTAAATGGGACTTCTCAAAACCTGATAGTGAATATGATAAAAGCAATTCTAAGCAGAAAGGGTTTAAATACTTTAGAGAGGATTTTTATTCAGATAATATAGAATCTCGCCACTTTAATAAGTGGGATTTCAGTCGTTTTAAAATAAAAGGTAAAAATGGGAAATTTATAGAAAATAAAAATGGAGATAATGAAGTTTTACTAAATGAAAGAAGTTTAGATTGCAAAGTATATATTAATAAATTAACTAAAAAAGGTTGTGATGAAAAGAAAAATATAAAATTTGTGCATATTTATAATTGGAGAGATCATACAGCAATAGATGCGACAAAATTAAAAAATACAATTGATTTGATTGGCAAAGAATTAACAATAAACCCAACAAAAGAAAATATAGCTGTCCATTGTCTTGCGGGATTAGGAAGAACAGGGGAGTTTATTGCTTTAATGGAAATGATGAAAATGATAGAGGCAGGAAATACAAAAACAAAAAGCTTAGAAAGTATTCTCGTTCATTTAAGGGAAAATCGCAGTAGGGAGGTACTTAAAAGGAAATCACAAGTTGATGAGCTGATTAAGTTTGCAATAAATCATAACATTCCTTTAGTCAATGATAATATTGAAATAAAATAATATTTATTCAAAAAATAACTATAACCATCCCCATTGTATTTACAATGGGG