Homologs in group_3852

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS13350 PMI_RS13350 31.9 Proteus mirabilis HI4320 - protein-tyrosine phosphatase family protein

Distribution of the homologs in the orthogroup group_3852

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3852

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15273 1.48e-22 102 32 8 239 1 yopH Tyrosine-protein phosphatase YopH Yersinia enterocolitica
P08538 1.57e-22 102 32 8 239 1 yopH Tyrosine-protein phosphatase YopH Yersinia pseudotuberculosis serotype I (strain IP32953)
P74873 2.15e-17 87 28 5 214 1 sptP Secreted effector protein SptP Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PEA9 3.07e-17 87 28 5 214 3 sptP Secreted effector protein SptP Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P74851 1.54e-16 85 28 5 214 3 sptP Secreted effector protein SptP Salmonella typhi
P17706 5.47e-06 52 25 9 234 1 PTPN2 Tyrosine-protein phosphatase non-receptor type 2 Homo sapiens
P35233 1.42e-05 50 25 9 234 1 Ptpn2 Tyrosine-protein phosphatase non-receptor type 2 Rattus norvegicus
Q64455 3.64e-05 50 25 7 189 1 Ptprj Receptor-type tyrosine-protein phosphatase eta Mus musculus
Q12913 7.76e-05 48 27 9 194 1 PTPRJ Receptor-type tyrosine-protein phosphatase eta Homo sapiens
P23469 0.000103 48 24 14 313 1 PTPRE Receptor-type tyrosine-protein phosphatase epsilon Homo sapiens
P32586 0.000105 48 24 8 237 1 pyp2 Tyrosine-protein phosphatase 2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P18433 0.000142 47 25 13 280 1 PTPRA Receptor-type tyrosine-protein phosphatase alpha Homo sapiens
P18052 0.000161 47 25 13 271 1 Ptpra Receptor-type tyrosine-protein phosphatase alpha Mus musculus
Q6PB44 0.000395 46 27 11 181 1 Ptpn23 Tyrosine-protein phosphatase non-receptor type 23 Mus musculus
B2GV87 0.000478 46 23 13 313 2 Ptpre Receptor-type tyrosine-protein phosphatase epsilon Rattus norvegicus
P49446 0.000508 46 24 9 240 1 Ptpre Receptor-type tyrosine-protein phosphatase epsilon Mus musculus
Q9H3S7 0.000655 45 24 8 177 1 PTPN23 Tyrosine-protein phosphatase non-receptor type 23 Homo sapiens
P08575 0.000701 45 24 8 206 1 PTPRC Receptor-type tyrosine-protein phosphatase C Homo sapiens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11205
Feature type CDS
Gene -
Product protein-tyrosine phosphatase family protein
Location 380060 - 381307 (strand: 1)
Length 1248 (nucleotides) / 415 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3852
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00102 Protein-tyrosine phosphatase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5599 Signal transduction mechanisms (T) T Protein tyrosine phosphatase

Protein Sequence

MMPNIHQQLSVHSRQGQEQSPPPLPPKTQHQGRTMVLQASQSRPPAPLPRPEHSLFDNVPLRQHHTTAGSNHRNAVYDTCVPTTALMQPPSRPAPVPPSRVHEFMQPPSFHAPSPPSSQERARMPLPGEGAHLSLAQRRAAPQLTPFVPDMKTGMSGNAFKQLEIKTSDRLDPDNFIARTNHQRFGNIDTCAATRLFTPQGKGLPANQMKVDGIDLAMRSQYPKPEGLRDHLCMLADQKPAVLVVLSSDKDIEGRRLPAYFKESDQYSDVSVACKFNPAARTAMAGNLELHNYRIEITVNGKTTPISVIHVNNWEDCTTVDSSALTKLVSGINQKIEQKVKQDSSYNPQPFIHCSAGIGRTGVVAGAMEILKPGNKNTPEEIVLQLRETGCSKMVQTSDQFNTLINLHKEVKSGS

Flanking regions ( +/- flanking 50bp)

TTAAAATCAGCAGATTATCTGTTGGATCTCCATTAATCATAAAAGGAATTATGATGCCTAATATTCATCAGCAATTATCTGTGCATAGCCGGCAGGGGCAGGAACAATCTCCTCCGCCTTTACCACCTAAAACACAGCATCAGGGGCGGACGATGGTGTTACAGGCGTCACAAAGCCGTCCTCCTGCACCTTTGCCCCGCCCGGAACATTCTCTTTTTGATAATGTTCCGTTACGCCAGCATCATACAACTGCGGGTTCAAATCATCGTAATGCGGTGTATGACACTTGCGTACCAACTACCGCCCTTATGCAACCGCCATCCCGCCCGGCACCGGTTCCTCCGTCACGGGTACATGAATTTATGCAGCCCCCGTCTTTTCATGCACCATCACCGCCATCATCACAGGAACGCGCCAGAATGCCGTTACCGGGAGAGGGGGCGCATTTATCACTGGCACAACGCAGAGCGGCACCTCAACTGACACCTTTCGTTCCGGATATGAAAACGGGCATGTCGGGAAATGCATTTAAGCAATTGGAAATAAAAACATCAGACCGGCTTGATCCGGATAATTTTATTGCCAGAACCAATCATCAACGCTTTGGTAATATTGATACCTGCGCAGCAACCCGGTTGTTTACACCGCAAGGCAAAGGTCTGCCTGCAAACCAAATGAAGGTTGACGGGATAGATCTGGCGATGCGCAGTCAGTACCCTAAACCAGAAGGACTTCGCGACCATCTATGTATGCTGGCAGATCAAAAACCGGCGGTATTGGTTGTGCTTTCTTCTGATAAGGATATTGAGGGCAGGAGGCTTCCTGCGTATTTCAAAGAAAGTGATCAATATAGCGATGTTTCTGTCGCATGCAAATTTAACCCGGCAGCGCGTACTGCAATGGCAGGTAACCTGGAATTGCATAATTACCGGATAGAAATAACAGTAAACGGCAAAACAACACCTATATCGGTTATACATGTTAATAACTGGGAAGACTGCACCACCGTTGATTCTTCGGCACTGACGAAACTGGTTTCAGGTATTAATCAGAAAATTGAGCAGAAGGTTAAACAAGACAGTAGTTACAACCCTCAGCCATTTATTCATTGCAGTGCCGGAATCGGTCGTACCGGCGTTGTTGCCGGTGCGATGGAAATATTGAAGCCTGGTAATAAGAACACGCCGGAGGAAATAGTTTTGCAACTACGTGAAACCGGTTGTTCAAAAATGGTACAGACTTCAGATCAGTTCAATACGCTGATAAATCTGCATAAAGAAGTAAAATCCGGATCTTAAAACACCATAAAGGGAGTTACTATGGGACCTGTACAGGGAACACAAGGACA