Homologs in group_4607

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4607

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4607

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8KRZ2 1.17e-06 46 41 0 39 3 xerC Putative tyrosine recombinase XerC Pseudomonas syringae
Q9F771 1.69e-06 45 41 0 41 3 xerC Putative tyrosine recombinase XerC Pseudomonas aeruginosa

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13020
Feature type CDS
Gene -
Product integrase
Location 2886551 - 2886730 (strand: -1)
Length 180 (nucleotides) / 59 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4607
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4974 Replication, recombination and repair (L) L Site-specific recombinase XerD

Protein Sequence

MLQGVGRGICRYFYLMMQSPERNLHVVKRLLGHASITSILEYIDESVDNLRDILEAELM

Flanking regions ( +/- flanking 50bp)

CTCTTCTAGTTCTTCTAGCGGTGGCGGCGGTGGTTCGAGTGGTGGTGGGGGTGCTTCAGGGAGTTGGTAGAGGAATATGTCGCTATTTTTATCTTATGATGCAATCACCAGAGCGTAATCTGCATGTTGTGAAAAGGCTATTAGGGCATGCCAGTATTACATCGATATTAGAATACATTGATGAAAGTGTTGATAACTTGCGAGATATACTTGAAGCGGAATTGATGTGATAAGAATAACAGGAGGAGTATCTAGATTTGACAGCAATTAGGAAAGAAAG