Homologs in group_809

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03820 FBDBKF_03820 82.9 Morganella morganii S1 dcuA Anaerobic C4-dicarboxylate transporter
EHELCC_06715 EHELCC_06715 82.9 Morganella morganii S2 dcuA Anaerobic C4-dicarboxylate transporter
NLDBIP_07040 NLDBIP_07040 82.9 Morganella morganii S4 dcuA Anaerobic C4-dicarboxylate transporter
LHKJJB_06575 LHKJJB_06575 82.9 Morganella morganii S3 dcuA Anaerobic C4-dicarboxylate transporter
HKOGLL_04355 HKOGLL_04355 82.9 Morganella morganii S5 dcuA Anaerobic C4-dicarboxylate transporter
F4V73_RS11050 F4V73_RS11050 83.1 Morganella psychrotolerans - anaerobic C4-dicarboxylate transporter

Distribution of the homologs in the orthogroup group_809

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_809

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABN8 0.0 687 82 2 441 3 dcuA C4-dicarboxylate transporter DcuA Shigella flexneri
P0ABN5 0.0 687 82 2 441 1 dcuA C4-dicarboxylate transporter DcuA Escherichia coli (strain K12)
P0ABN6 0.0 687 82 2 441 3 dcuA C4-dicarboxylate transporter DcuA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABN7 0.0 687 82 2 441 3 dcuA C4-dicarboxylate transporter DcuA Escherichia coli O157:H7
O34245 6.61e-170 486 58 5 442 3 dcuA C4-dicarboxylate transporter DcuA Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W)
O25425 5.87e-133 393 51 6 445 3 dcuA C4-dicarboxylate transporter DcuA Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZLC0 1.08e-132 392 50 6 445 3 dcuA C4-dicarboxylate transporter DcuA Helicobacter pylori (strain J99 / ATCC 700824)
P44855 6.17e-81 259 41 8 441 3 dcuB Anaerobic C4-dicarboxylate transporter DcuB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0ABP2 3.53e-75 244 36 7 412 3 dcuB Anaerobic C4-dicarboxylate transporter DcuB Shigella flexneri
P0ABN9 3.53e-75 244 36 7 412 1 dcuB Anaerobic C4-dicarboxylate transporter DcuB Escherichia coli (strain K12)
P0ABP0 3.53e-75 244 36 7 412 3 dcuB Anaerobic C4-dicarboxylate transporter DcuB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABP1 3.53e-75 244 36 7 412 3 dcuB Anaerobic C4-dicarboxylate transporter DcuB Escherichia coli O157:H7
P40684 2.67e-64 206 90 0 132 3 dcuA C4-dicarboxylate transporter DcuA (Fragment) Serratia marcescens

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12595
Feature type CDS
Gene -
Product anaerobic C4-dicarboxylate transporter
Location 2791305 - 2792630 (strand: 1)
Length 1326 (nucleotides) / 441 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_809
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03605 Anaerobic c4-dicarboxylate membrane transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2704 Carbohydrate transport and metabolism (G) G Anaerobic C4-dicarboxylate transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07791 anaerobic C4-dicarboxylate transporter DcuA - -

Protein Sequence

MLAVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGTIPFDVISIIMAVIAAISAMQVAGGLDYLVDQTEKLLRRNPKYITILAPIVTYLLTLFAGTGNISLATLPVIAEVAKEQGIKPCRPLSTGVVAAQIGITASPISAAVVYMASVMENPAMVGEGNTVSYITLLSILLPATFLAIILMSFIISWVFNSKLSDDAIYRQRLEQGLVELRNSKERRETLPGAKSSVMLFLLGVICVVTYAIINSPSLGIVKEPLMNTTNAILIIMLSVATLITVFCKVKTDNILNSSTFKAGMSACICILGVAWLGDTFVSSNIDWIKLTAGDLITGHPWLLAVIFFFCSALLYSQAATAKALMPMALALGVSPLTAIASFSAVSGLFILPTYPTLVAAVQMDDTGTTRIGKLVFNHPFFIPGTIGVILAVGFGFLFGGMIL

Flanking regions ( +/- flanking 50bp)

AATTTAACTTATCTTTCTCATTTTTTTAATTATCTCAAGGAGTAAACGCTATGTTAGCCGTAGAATTGATTATCGTTCTGCTGGCCATTTTCCTCGGTGCGAGACTAGGAGGAATTGGTATCGGGTTTGCCGGTGGTTTAGGGGTGTTAGTATTAGCCGCTATCGGTGTTAAACCAGGTACAATCCCTTTTGATGTGATCTCCATCATTATGGCTGTTATTGCCGCAATCTCTGCGATGCAGGTTGCTGGTGGTTTAGATTATTTAGTTGATCAAACAGAAAAACTATTAAGACGTAATCCTAAATACATCACAATACTTGCGCCAATTGTGACTTATTTATTAACTCTCTTTGCAGGTACAGGTAATATCTCTTTAGCTACATTACCCGTTATTGCTGAAGTTGCTAAAGAGCAAGGCATCAAACCTTGTCGCCCATTATCAACAGGTGTGGTTGCTGCGCAAATTGGTATTACAGCATCACCTATTTCTGCTGCGGTTGTTTATATGGCATCAGTCATGGAAAACCCTGCAATGGTCGGTGAAGGTAATACAGTAAGTTATATCACTCTGTTATCTATTTTATTACCAGCGACCTTCCTTGCTATTATTCTGATGTCATTCATCATCTCTTGGGTATTTAACTCAAAACTGTCTGATGATGCGATTTATCGTCAACGTTTAGAGCAAGGTCTAGTTGAATTACGTAATAGTAAAGAGCGTAGAGAAACATTACCGGGTGCTAAATCTTCTGTAATGCTATTCTTACTTGGTGTTATTTGTGTGGTCACTTATGCCATTATCAATAGCCCAAGTTTAGGCATTGTAAAAGAGCCGTTAATGAACACCACTAACGCTATCCTTATCATTATGCTGAGTGTGGCAACACTTATTACTGTTTTCTGTAAAGTTAAAACAGATAACATCTTAAACTCAAGTACATTTAAAGCAGGTATGAGTGCATGTATTTGTATTCTGGGTGTTGCTTGGTTAGGTGATACTTTCGTTTCAAGTAATATCGATTGGATCAAACTGACTGCCGGTGATTTAATCACAGGTCATCCTTGGTTATTAGCGGTTATTTTCTTCTTCTGCTCTGCCTTATTATATTCACAAGCGGCAACAGCAAAAGCGTTAATGCCAATGGCTTTAGCTTTAGGTGTTTCTCCATTAACAGCGATTGCATCATTCTCAGCAGTTTCTGGTCTATTTATTCTACCAACTTACCCAACACTGGTTGCTGCCGTTCAAATGGATGACACTGGTACAACTCGTATTGGTAAATTAGTCTTTAACCATCCATTCTTTATCCCTGGTACTATCGGTGTGATATTAGCGGTCGGATTTGGTTTCCTCTTCGGCGGTATGATTTTGTAGTTTAAAACCAATATTTAAAAAGACATTGCAAAAAGCTTTACTTTTTAACT