Homologs in group_3729

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS10260 F4V73_RS10260 37.3 Morganella psychrotolerans - molecular chaperone

Distribution of the homologs in the orthogroup group_3729

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3729

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31697 2.05e-29 113 31 8 228 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P59590 6.24e-29 112 31 8 221 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P62609 2.34e-27 107 30 8 229 1 focC Chaperone protein FocC Escherichia coli
P62610 2.34e-27 107 30 8 229 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P75749 6.52e-26 104 31 6 215 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P75856 1.78e-25 102 29 8 227 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
Q8X5E4 1.89e-25 102 29 8 227 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P42914 3.63e-25 102 32 7 210 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P33409 5.84e-24 99 32 11 234 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P46004 1.16e-23 98 29 8 247 3 aggD Chaperone protein AggD Escherichia coli
P53520 1.52e-23 98 31 10 238 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P37923 2.62e-23 97 30 8 223 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77616 1.7e-22 95 30 10 227 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P35757 4.58e-22 94 29 7 233 3 hifB Chaperone protein HifB Haemophilus influenzae
P45991 6.26e-22 93 30 7 233 3 hifB Chaperone protein HifB Haemophilus influenzae
P21646 1.2e-21 92 28 7 234 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P77599 4.49e-21 91 34 12 206 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P77249 1.68e-20 89 28 7 235 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P15319 3.06e-20 89 31 10 229 1 papD Chaperone protein PapD Escherichia coli
P25402 8.02e-20 87 31 10 227 3 fanE Chaperone protein FanE Escherichia coli
P43661 1.44e-19 87 29 10 241 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P33128 4.16e-19 86 28 8 240 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P53516 5.42e-19 85 31 6 187 3 afaB Chaperone protein AfaB Escherichia coli
P69966 6.16e-19 86 30 10 266 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 6.16e-19 86 30 10 266 3 psaB Chaperone protein PsaB Yersinia pestis
P26926 3.62e-18 84 29 7 232 1 caf1M Chaperone protein caf1M Yersinia pestis
P33407 3.53e-17 81 26 8 240 3 myfB Chaperone protein MyfB Yersinia enterocolitica
Q8X5K6 7.07e-17 80 28 9 225 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P33387 1.85e-16 79 27 6 219 3 sefB Chaperone protein SefB Salmonella enteritidis
P40876 2.1e-15 75 26 7 236 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P53518 1.94e-14 73 27 6 227 3 cssC Chaperone protein CssC Escherichia coli
P15483 2.99e-14 73 28 10 239 3 None Chaperone protein CS3-1 Escherichia coli
P53519 4.05e-14 72 26 6 227 3 cssC Chaperone protein CssC Escherichia coli
P46738 6.65e-14 72 30 7 190 3 nfaE Chaperone protein NfaE Escherichia coli
P33342 1.46e-12 68 29 11 227 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
Q05433 3.85e-08 55 26 10 192 3 clpE Chaperone protein ClpE Escherichia coli
P25401 5.62e-08 55 24 8 191 1 faeE Chaperone protein FaeE Escherichia coli
P42183 0.000202 43 30 3 100 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12535
Feature type CDS
Gene -
Product molecular chaperone
Location 2780325 - 2781041 (strand: -1)
Length 717 (nucleotides) / 238 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3729
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MNILKTISLLFSCFIFSASYSYAGLSLSQSRIIFSEGDKSQSVQINNDTDNLYLSQNMITADLDGKKDEHFIVLPPLKRLEPQSSVSIKILPRSLDTLPSDRESLFFFTAYLIPETKRGQQNNSGDLSLKINMVTKIIIKGFYRPNELAITSLDSHAKKITFKKVGNNVQVNNPTPYYFTVSNLKFDGKSYQSANAPMVAPFSSLNLAIDKSIKQVSWQYIDDFGGLSNTFENKIIVE

Flanking regions ( +/- flanking 50bp)

CCCTTTTACGGCAACAGTAGTGCTTAGCTTTTTTTCTGATTGATTAAAATATGAATATATTAAAAACGATTTCATTACTTTTTAGCTGTTTTATTTTTTCTGCATCATATAGTTATGCAGGGCTATCTTTGTCACAAAGTCGCATTATATTTTCTGAGGGAGATAAAAGTCAAAGTGTACAAATAAATAATGATACAGATAATCTTTATTTATCTCAAAATATGATAACGGCTGATTTAGATGGCAAAAAAGATGAACATTTTATTGTATTGCCACCGTTAAAACGATTAGAGCCTCAGTCATCGGTTTCTATAAAAATTTTACCACGCTCTTTAGATACATTGCCAAGTGATCGGGAATCACTCTTTTTTTTCACTGCATATTTGATACCTGAAACAAAAAGAGGGCAACAAAATAATAGTGGTGATTTATCACTAAAAATTAATATGGTAACAAAAATTATCATAAAAGGATTTTATCGACCAAATGAATTAGCCATAACATCACTAGATAGTCATGCTAAGAAGATAACCTTTAAAAAAGTAGGTAATAATGTGCAAGTCAATAACCCAACACCTTATTATTTTACGGTATCAAATTTAAAATTCGATGGCAAAAGTTATCAATCAGCAAATGCACCTATGGTTGCGCCATTTTCGTCACTCAATTTAGCTATAGATAAATCAATTAAACAGGTTAGTTGGCAATATATTGATGATTTTGGTGGATTATCAAATACATTTGAAAATAAAATAATTGTGGAGTGACTAAATGTTATCTTTTTTAAGAGGTAGAAAAAAAAATATTATCCAGATAG