Homologs in group_3729

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS12535 PMI_RS12535 37.3 Proteus mirabilis HI4320 - molecular chaperone

Distribution of the homologs in the orthogroup group_3729

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3729

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42914 2.24e-38 136 37 7 222 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P31697 1.25e-33 124 31 5 214 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P62609 5.13e-33 122 32 5 222 1 focC Chaperone protein FocC Escherichia coli
P62610 5.13e-33 122 32 5 222 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P59590 7.2e-33 122 31 5 214 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P75856 6.07e-26 103 31 6 231 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
Q8X5E4 1.43e-24 100 30 7 231 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
Q8X5K6 2e-24 100 28 4 226 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P37923 3.17e-24 99 32 7 217 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P43661 1.95e-23 97 29 5 216 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P15319 3.66e-23 97 31 8 226 1 papD Chaperone protein PapD Escherichia coli
P77249 4.04e-21 91 29 6 216 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P21646 3.85e-20 88 29 5 226 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P45991 4.34e-20 89 27 6 224 3 hifB Chaperone protein HifB Haemophilus influenzae
P53520 2.55e-19 87 27 6 233 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P77616 3.68e-19 86 28 10 232 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P35757 1.77e-18 84 27 6 224 3 hifB Chaperone protein HifB Haemophilus influenzae
P46004 1.57e-17 82 28 7 219 3 aggD Chaperone protein AggD Escherichia coli
P40876 3.62e-17 80 25 5 241 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P69966 3.69e-17 81 27 5 224 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 3.69e-17 81 27 5 224 3 psaB Chaperone protein PsaB Yersinia pestis
P26926 7.88e-17 80 30 8 215 1 caf1M Chaperone protein caf1M Yersinia pestis
P77599 1.38e-16 79 28 8 202 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P33407 1.58e-16 79 24 8 257 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P33342 4.42e-16 77 29 10 232 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P75749 1.32e-15 76 32 10 195 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P15483 1.78e-15 76 29 6 210 3 None Chaperone protein CS3-1 Escherichia coli
P53516 4.33e-15 75 26 4 167 3 afaB Chaperone protein AfaB Escherichia coli
P33409 1.58e-13 70 28 8 207 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P25402 1.75e-13 70 28 3 180 3 fanE Chaperone protein FanE Escherichia coli
P53519 5.84e-13 69 28 10 226 3 cssC Chaperone protein CssC Escherichia coli
P33128 5.99e-13 69 25 8 234 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P25401 8.88e-13 69 29 6 176 1 faeE Chaperone protein FaeE Escherichia coli
Q05433 1.06e-12 68 27 8 228 3 clpE Chaperone protein ClpE Escherichia coli
P33387 7.79e-12 66 24 4 208 3 sefB Chaperone protein SefB Salmonella enteritidis
P46738 6.77e-11 63 25 4 167 3 nfaE Chaperone protein NfaE Escherichia coli
P53518 2.02e-10 62 25 8 226 3 cssC Chaperone protein CssC Escherichia coli
P42183 6.97e-06 47 32 4 91 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli
P28722 0.000148 45 22 5 175 3 yhcA Uncharacterized fimbrial chaperone YhcA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10260
Feature type CDS
Gene -
Product molecular chaperone
Location 163807 - 164523 (strand: -1)
Length 717 (nucleotides) / 238 (amino acids)
In genomic island GI65

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3729
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07346 fimbrial chaperone protein Two-component system -

Protein Sequence

MRNIVLVIFLSLLVQTVSAGGIGLSKSRIIFSATEKNQTVDINNGSDKPYLIQASVIQTPEGAPSESFIISPPLFRLNANSDYSVRIIPKSTDKLPKDKESIFYLKVRAIPALNTSKNNTPGADLVFVTSIVVKLHYRPATLPAPEQPVFEKITLVKNNQGWNIYNPTPYYLTVTNLTVNHHPQPGSILMSPSGLQKIDSTADIQQADWQVINDFGGRSETIHFQPAYQKNNMPVAAE

Flanking regions ( +/- flanking 50bp)

CTGACCTACATGGTCGATTAAGCAACTATAGTGAATTCAGGATATTATTTATGCGAAATATAGTACTGGTAATTTTTCTGTCACTGCTGGTCCAGACCGTATCTGCCGGAGGTATCGGTCTGAGTAAAAGCCGGATTATTTTTTCAGCTACAGAAAAAAATCAAACAGTTGATATTAATAATGGCAGTGATAAACCATACCTGATCCAGGCCTCTGTTATCCAAACACCGGAAGGAGCACCGAGCGAATCGTTTATCATTTCGCCCCCTTTATTCCGGCTTAATGCCAATAGTGATTATTCGGTCAGAATAATACCCAAAAGCACCGATAAATTACCGAAAGATAAAGAATCCATTTTTTATTTAAAAGTCCGGGCTATTCCGGCTTTAAATACCAGCAAAAATAATACCCCCGGGGCTGATTTAGTTTTCGTCACCTCCATTGTCGTTAAACTACATTACCGGCCTGCTACATTACCAGCACCAGAACAGCCTGTTTTTGAAAAAATAACATTAGTTAAAAATAATCAGGGCTGGAACATTTATAATCCGACACCTTATTACCTGACTGTGACCAACCTGACGGTAAATCATCACCCTCAACCCGGTAGTATTCTGATGTCCCCGTCAGGTCTGCAAAAAATAGATAGCACGGCTGATATTCAGCAGGCTGACTGGCAAGTAATTAATGATTTCGGCGGTCGCTCAGAAACGATTCATTTTCAGCCCGCTTATCAGAAAAATAATATGCCGGTCGCAGCAGAATGATTTTGTCGGATTGAGTGATGTCACCTATTGCAATTCCTTATGAAAGATAA