Homologs in group_2200

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16785 FBDBKF_16785 57.8 Morganella morganii S1 - Transcriptional regulator, AbiEi antitoxin, Type IV TA system
EHELCC_10675 EHELCC_10675 57.8 Morganella morganii S2 - Transcriptional regulator, AbiEi antitoxin, Type IV TA system
NLDBIP_11020 NLDBIP_11020 57.8 Morganella morganii S4 - Transcriptional regulator, AbiEi antitoxin, Type IV TA system
LHKJJB_10335 LHKJJB_10335 57.8 Morganella morganii S3 - Transcriptional regulator, AbiEi antitoxin, Type IV TA system
HKOGLL_16500 HKOGLL_16500 57.8 Morganella morganii S5 - Transcriptional regulator, AbiEi antitoxin, Type IV TA system
PMI_RS11460 PMI_RS11460 54.3 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_2200

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2200

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12315
Feature type CDS
Gene -
Product DUF6088 family protein
Location 2731174 - 2731710 (strand: 1)
Length 537 (nucleotides) / 178 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2200
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF19570 Family of unknown function (DUF6088)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5340 Defense mechanisms (V) V Abortive phage infection protein AbiEi, antitoxin conponent of an AbiEi-AbiEii TA system

Protein Sequence

MKKIEAIKKLLEYDKRGRCVFTNSDLANIFHQDNERALRAGIKRLQDDGLLTRIINGVYLYNLAQSKGSDTLEQIAKTIRRGEYNYISLESALSDFGVISQIPVDRLTVMTTGRSGEFKTPLGTIEFTHTKRAPIDIIENTTLVGRPLRLATKQTAYRDLKRVGRNTHLVSKEELYEN

Flanking regions ( +/- flanking 50bp)

ATACAGTTATGACATGTTTAAGTGTTATTTTTGATAACTAAAGGTGTATTGTGAAAAAGATTGAGGCAATTAAAAAGCTCTTAGAATATGACAAGCGCGGTCGCTGCGTTTTTACTAATTCAGATCTGGCCAACATCTTTCATCAAGATAATGAACGAGCATTGCGTGCAGGAATTAAACGTTTGCAAGACGATGGCTTACTCACTAGGATCATTAATGGTGTGTACTTATACAATTTAGCGCAGTCAAAAGGCAGCGATACGTTGGAGCAAATTGCTAAAACTATTCGACGTGGGGAATATAACTACATTAGCTTGGAGTCTGCCCTTTCTGATTTTGGTGTTATTTCGCAAATTCCAGTAGATCGCTTAACTGTTATGACAACGGGACGTTCCGGTGAATTCAAAACGCCTTTGGGTACAATTGAATTTACACATACAAAACGAGCTCCAATCGACATTATAGAGAATACCACTTTAGTCGGCAGACCACTTAGATTAGCAACAAAACAAACTGCATACAGAGACTTAAAACGAGTCGGCCGAAATACACATTTAGTAAGCAAGGAGGAACTATATGAAAATTGATCAAGAAAATTTCGCGCTATTGGTGAATAAAGCAATGCAGGTCGGAAATG