Homologs in group_4578

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4578

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4578

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12180
Feature type CDS
Gene -
Product type IV toxin-antitoxin system AbiEi family antitoxin
Location 2693397 - 2694188 (strand: -1)
Length 792 (nucleotides) / 263 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4578
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system
PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5340 Defense mechanisms (V) V Abortive phage infection protein AbiEi, antitoxin conponent of an AbiEi-AbiEii TA system

Protein Sequence

MSSKINWLVAHTSPGALVLQQWLTENGVSYSLAQKYAQNGWLKKLCSGVYYRPDARGDIKPTWVDAIQALDVQLGVSVHLAGLSSLTHQGLSHYLQLNKEQVWICVKNKSSLPKWFREFPYQNWFYCGNHKLEVNPEKDLKRITVKEKELTVSCAELAAYEVVDGIGKLISFEHVAELFQGLVNLSPRKVQDILERSSSVQANRIFLFLGRYYDHQWVNRVDETRIKLGAGKRQVVEKGRFDERYQITVPEILSVKKGEQHNG

Flanking regions ( +/- flanking 50bp)

TAAACTATATGGTTTATACTGTTCGTGATATTAATACTTTGGGTGTTAAAATGTCATCTAAGATAAACTGGCTTGTTGCTCATACTTCTCCTGGTGCGCTAGTACTTCAGCAATGGCTGACTGAAAACGGTGTGAGCTATTCCTTGGCTCAAAAGTACGCGCAGAACGGTTGGCTAAAGAAGCTATGTTCTGGCGTGTATTATCGTCCAGATGCGCGGGGCGATATAAAGCCAACTTGGGTTGATGCCATTCAAGCATTAGATGTGCAATTGGGCGTTTCAGTTCATTTGGCTGGATTGAGCAGCTTAACTCACCAAGGACTGAGTCACTATTTACAGCTGAACAAAGAGCAAGTTTGGATTTGCGTTAAAAATAAGTCGTCCTTACCAAAATGGTTTCGTGAATTCCCTTATCAGAATTGGTTTTACTGTGGAAATCATAAGCTTGAAGTGAATCCCGAGAAAGATTTGAAAAGGATCACGGTTAAAGAGAAAGAACTCACTGTCAGCTGTGCAGAACTTGCTGCCTATGAAGTGGTAGACGGGATTGGGAAGCTGATTTCATTTGAGCATGTCGCAGAATTATTTCAGGGTTTAGTCAATCTTAGTCCTAGAAAAGTACAAGATATTCTTGAACGAAGCAGCTCTGTTCAGGCAAACCGAATATTTCTATTTCTGGGTCGATACTACGATCACCAGTGGGTCAATCGCGTAGATGAAACAAGAATTAAATTAGGTGCAGGAAAGCGGCAGGTTGTCGAAAAAGGACGTTTTGATGAGCGATATCAAATCACAGTGCCAGAGATATTAAGCGTCAAAAAAGGTGAACAACATAATGGATAAAGACAGCCCATATTACAAACAGGTTTCCTTGCTCATAAGAATGCTTCCTG