Homologs in group_226

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00815 FBDBKF_00815 26.3 Morganella morganii S1 flhC flagellar transcriptional regulator FlhC
EHELCC_00730 EHELCC_00730 26.3 Morganella morganii S2 flhC flagellar transcriptional regulator FlhC
NLDBIP_02730 NLDBIP_02730 26.3 Morganella morganii S4 flhC flagellar transcriptional regulator FlhC
LHKJJB_04245 LHKJJB_04245 26.3 Morganella morganii S3 flhC flagellar transcriptional regulator FlhC
HKOGLL_02800 HKOGLL_02800 26.3 Morganella morganii S5 flhC flagellar transcriptional regulator FlhC
F4V73_RS06810 F4V73_RS06810 26.3 Morganella psychrotolerans flhC flagellar transcriptional regulator FlhC
PMI_RS08160 PMI_RS08160 27.6 Proteus mirabilis HI4320 flhC flagellar transcriptional regulator FlhC

Distribution of the homologs in the orthogroup group_226

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_226

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A1WJ05 1.78e-12 65 28 3 161 3 flhC Flagellar transcriptional regulator FlhC Verminephrobacter eiseniae (strain EF01-2)
C4KBU2 1.1e-08 55 28 5 156 3 flhC Flagellar transcriptional regulator FlhC Thauera aminoaromatica
D9SEU0 1.08e-07 52 27 5 166 3 flhC Flagellar transcriptional regulator FlhC Gallionella capsiferriformans (strain ES-2)
Q0AI30 1.71e-07 52 28 3 149 3 flhC Flagellar transcriptional regulator FlhC Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57)
Q39LF8 4.88e-07 51 27 6 175 3 flhC Flagellar transcriptional regulator FlhC Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)
O52222 5.75e-07 50 28 5 150 2 flhC Flagellar transcriptional regulator FlhC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
D5W6H7 1.86e-05 46 28 4 134 3 flhC Flagellar transcriptional regulator FlhC Paraburkholderia atlantica
P0ABZ0 2.13e-05 46 27 5 150 3 flhC Flagellar transcriptional regulator FlhC Shigella flexneri
P0ABY7 2.13e-05 46 27 5 150 1 flhC Flagellar transcriptional regulator FlhC Escherichia coli (strain K12)
P0ABY8 2.13e-05 46 27 5 150 3 flhC Flagellar transcriptional regulator FlhC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ABY9 2.13e-05 46 27 5 150 3 flhC Flagellar transcriptional regulator FlhC Escherichia coli O157:H7
Q1LMQ4 4.12e-05 45 27 4 161 3 flhC Flagellar transcriptional regulator FlhC Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
Q0K2R3 6.57e-05 45 26 4 149 3 flhC Flagellar transcriptional regulator FlhC Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O86047 9.26e-05 44 26 5 150 3 flhC Flagellar transcriptional regulator FlhC Yersinia enterocolitica
O85807 0.000371 42 24 5 152 3 flhC Flagellar transcriptional regulator FlhC Serratia marcescens
O34202 0.000652 42 26 5 153 1 flhC Flagellar transcriptional regulator FlhC Proteus mirabilis

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12015
Feature type CDS
Gene -
Product FlhC family transcriptional regulator
Location 2654763 - 2655296 (strand: 1)
Length 534 (nucleotides) / 177 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_226
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF05280 Flagellar transcriptional activator (FlhC)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02402 flagellar transcriptional activator FlhC Two-component system
Quorum sensing
Biofilm formation - Escherichia coli
Flagellar assembly		 -

Protein Sequence

MIDNLSKSELFTRASLLIKYGFRTTIIALDTGLPIHIIRRLHKEVTGKSPCPGQLPESDAIVKSRRALVEGSLLMALYVNIGGDNVYKQLNIDALMKAYDAYLVAREEADLPAEIPWKKLTINEGWVLARDLRSQLASLHRCRCGSLYLTVSQQRIQLKCPVCEIMAEQTTRALFEN

Flanking regions ( +/- flanking 50bp)

ATCCCAAGAATCGCTTATTTATTATCAACCCTAAACAACAAGGGGGATGCATGATTGATAACCTGTCCAAAAGTGAGCTGTTTACCCGAGCCTCGCTACTTATTAAATACGGATTTAGGACAACCATTATCGCGCTCGATACTGGTTTGCCAATCCACATTATCAGAAGGCTTCACAAAGAAGTGACTGGCAAGTCACCTTGCCCTGGTCAATTGCCAGAATCTGATGCCATTGTTAAAAGCAGAAGAGCCTTAGTTGAAGGCTCCCTGCTGATGGCGCTTTATGTCAATATTGGTGGTGATAATGTCTACAAGCAATTAAATATTGATGCTTTGATGAAGGCTTACGATGCGTACTTGGTTGCAAGGGAAGAAGCAGATCTTCCAGCTGAAATCCCCTGGAAAAAACTAACCATCAATGAAGGTTGGGTTCTAGCTCGTGATTTAAGATCACAGCTTGCATCCTTACACCGGTGTCGGTGCGGCAGTCTGTATTTGACGGTATCACAACAGCGCATTCAGCTTAAATGCCCTGTGTGTGAGATTATGGCCGAGCAAACCACTAGAGCACTTTTTGAGAACTAACATGCTGATGCATGATTTGATTGTGCACCGCCCGTGCACTTTGAGAGTAC