Homologs in group_4264
0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product |
|---|
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|---|---|---|---|---|---|---|---|---|
| A1WJ05 | 1.78e-12 | 65 | 28 | 3 | 161 | 3 | flhC | Flagellar transcriptional regulator FlhC | Verminephrobacter eiseniae (strain EF01-2) |
| C4KBU2 | 1.1e-08 | 55 | 28 | 5 | 156 | 3 | flhC | Flagellar transcriptional regulator FlhC | Thauera aminoaromatica |
| D9SEU0 | 1.08e-07 | 52 | 27 | 5 | 166 | 3 | flhC | Flagellar transcriptional regulator FlhC | Gallionella capsiferriformans (strain ES-2) |
| Q0AI30 | 1.71e-07 | 52 | 28 | 3 | 149 | 3 | flhC | Flagellar transcriptional regulator FlhC | Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57) |
| Q39LF8 | 4.88e-07 | 51 | 27 | 6 | 175 | 3 | flhC | Flagellar transcriptional regulator FlhC | Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383) |
| O52222 | 5.75e-07 | 50 | 28 | 5 | 150 | 2 | flhC | Flagellar transcriptional regulator FlhC | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) |
| D5W6H7 | 1.86e-05 | 46 | 28 | 4 | 134 | 3 | flhC | Flagellar transcriptional regulator FlhC | Paraburkholderia atlantica |
| P0ABZ0 | 2.13e-05 | 46 | 27 | 5 | 150 | 3 | flhC | Flagellar transcriptional regulator FlhC | Shigella flexneri |
| P0ABY7 | 2.13e-05 | 46 | 27 | 5 | 150 | 1 | flhC | Flagellar transcriptional regulator FlhC | Escherichia coli (strain K12) |
| P0ABY8 | 2.13e-05 | 46 | 27 | 5 | 150 | 3 | flhC | Flagellar transcriptional regulator FlhC | Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) |
| P0ABY9 | 2.13e-05 | 46 | 27 | 5 | 150 | 3 | flhC | Flagellar transcriptional regulator FlhC | Escherichia coli O157:H7 |
| Q1LMQ4 | 4.12e-05 | 45 | 27 | 4 | 161 | 3 | flhC | Flagellar transcriptional regulator FlhC | Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) |
| Q0K2R3 | 6.57e-05 | 45 | 26 | 4 | 149 | 3 | flhC | Flagellar transcriptional regulator FlhC | Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) |
| O86047 | 9.26e-05 | 44 | 26 | 5 | 150 | 3 | flhC | Flagellar transcriptional regulator FlhC | Yersinia enterocolitica |
| O85807 | 0.000371 | 42 | 24 | 5 | 152 | 3 | flhC | Flagellar transcriptional regulator FlhC | Serratia marcescens |
| O34202 | 0.000652 | 42 | 26 | 5 | 153 | 1 | flhC | Flagellar transcriptional regulator FlhC | Proteus mirabilis |
| Source | Proteus mirabilis HI4320 |
|---|---|
| Locus tag | PMI_RS12015 |
| Feature type | CDS |
| Gene | - |
| Product | FlhC family transcriptional regulator |
| Location | 2654763 - 2655296 (strand: 1) |
| Length | 534 (nucleotides) / 177 (amino acids) |
| In genomic island | GI59 |
| Accession | NC_010554 |
|---|---|
| Length | 4063606 nucleotides |
| Topology | circular |
| Plasmid | False |
| Orthogroup | group_4264 | |
|---|---|---|
| Orthogroup size | 1 | |
| N. genomes | 1 |
| PF05280 | Flagellar transcriptional activator (FlhC) |
|---|
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K02402 | flagellar transcriptional activator FlhC | Two-component system Quorum sensing Biofilm formation - Escherichia coli Flagellar assembly |
- |
MIDNLSKSELFTRASLLIKYGFRTTIIALDTGLPIHIIRRLHKEVTGKSPCPGQLPESDAIVKSRRALVEGSLLMALYVNIGGDNVYKQLNIDALMKAYDAYLVAREEADLPAEIPWKKLTINEGWVLARDLRSQLASLHRCRCGSLYLTVSQQRIQLKCPVCEIMAEQTTRALFEN
ATCCCAAGAATCGCTTATTTATTATCAACCCTAAACAACAAGGGGGATGCATGATTGATAACCTGTCCAAAAGTGAGCTGTTTACCCGAGCCTCGCTACTTATTAAATACGGATTTAGGACAACCATTATCGCGCTCGATACTGGTTTGCCAATCCACATTATCAGAAGGCTTCACAAAGAAGTGACTGGCAAGTCACCTTGCCCTGGTCAATTGCCAGAATCTGATGCCATTGTTAAAAGCAGAAGAGCCTTAGTTGAAGGCTCCCTGCTGATGGCGCTTTATGTCAATATTGGTGGTGATAATGTCTACAAGCAATTAAATATTGATGCTTTGATGAAGGCTTACGATGCGTACTTGGTTGCAAGGGAAGAAGCAGATCTTCCAGCTGAAATCCCCTGGAAAAAACTAACCATCAATGAAGGTTGGGTTCTAGCTCGTGATTTAAGATCACAGCTTGCATCCTTACACCGGTGTCGGTGCGGCAGTCTGTATTTGACGGTATCACAACAGCGCATTCAGCTTAAATGCCCTGTGTGTGAGATTATGGCCGAGCAAACCACTAGAGCACTTTTTGAGAACTAACATGCTGATGCATGATTTGATTGTGCACCGCCCGTGCACTTTGAGAGTAC
