Homologs in group_218

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00820 FBDBKF_00820 28.3 Morganella morganii S1 flhD flagellar transcriptional regulator FlhD
EHELCC_00725 EHELCC_00725 28.3 Morganella morganii S2 flhD flagellar transcriptional regulator FlhD
NLDBIP_02735 NLDBIP_02735 28.3 Morganella morganii S4 flhD flagellar transcriptional regulator FlhD
LHKJJB_04250 LHKJJB_04250 28.3 Morganella morganii S3 flhD flagellar transcriptional regulator FlhD
HKOGLL_02795 HKOGLL_02795 28.3 Morganella morganii S5 flhD flagellar transcriptional regulator FlhD
F4V73_RS06815 F4V73_RS06815 27.3 Morganella psychrotolerans flhD flagellar transcriptional regulator FlhD
PMI_RS08165 PMI_RS08165 26.5 Proteus mirabilis HI4320 flhD flagellar transcriptional regulator FlhD

Distribution of the homologs in the orthogroup group_218

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_218

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q0AI31 0.000217 40 32 1 80 3 flhD Flagellar transcriptional regulator FlhD Nitrosomonas eutropha (strain DSM 101675 / C91 / Nm57)
Q82SD3 0.000431 39 31 1 80 3 flhD Flagellar transcriptional regulator FlhD Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)
O85806 0.000583 39 27 1 100 3 flhD Flagellar transcriptional regulator FlhD Serratia marcescens

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS12010
Feature type CDS
Gene -
Product flagellar transcriptional regulator FlhD
Location 2654467 - 2654766 (strand: 1)
Length 300 (nucleotides) / 99 (amino acids)
In genomic island GI59

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_218
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF05247 Flagellar transcriptional activator (FlhD)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02403 flagellar transcriptional activator FlhD Two-component system
Quorum sensing
Biofilm formation - Escherichia coli
Flagellar assembly		 -

Protein Sequence

MTTNQQDFYQLNLAYLHAARELARIDPQEAVLRFGLTRDVVDALINAGVDDLQRVATSSFMLFQPRGNQSQLIEMVKSKGTGIPRIAYLLSTLNNKGDA

Flanking regions ( +/- flanking 50bp)

AGAGTGCTTTCTATTTATCGCAATATTTTACATGAACTGGAGGTCCGTCAATGACAACCAATCAACAAGACTTCTATCAATTAAACTTGGCGTACCTGCACGCAGCACGGGAATTGGCGCGCATTGATCCGCAAGAGGCTGTCTTGCGCTTTGGACTTACACGCGATGTGGTTGATGCTCTGATTAATGCTGGTGTTGACGACCTGCAACGAGTAGCGACCTCATCATTCATGCTGTTTCAACCAAGGGGTAACCAAAGCCAACTGATTGAGATGGTGAAGAGCAAAGGCACAGGTATCCCAAGAATCGCTTATTTATTATCAACCCTAAACAACAAGGGGGATGCATGATTGATAACCTGTCCAAAAGTGAGCTGTTTACCCGAGCCTCGCTACTTATT