Homologs in group_3825

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS02715 F4V73_RS02715 50.9 Morganella psychrotolerans - 3-deoxy-7-phosphoheptulonate synthase class II

Distribution of the homologs in the orthogroup group_3825

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3825

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P29976 3.71e-144 426 47 5 464 2 DHS1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Arabidopsis thaliana
Q00218 3.69e-142 420 47 4 441 2 DHS2 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Arabidopsis thaliana
P21357 5.78e-141 418 47 4 439 1 SHKA Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Solanum tuberosum
P37216 6.56e-141 417 47 4 439 2 None Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Solanum lycopersicum
P27608 1.74e-140 417 47 4 439 2 DHAPS-1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Nicotiana tabacum
A0A067XGX8 9.77e-140 414 47 4 446 2 DAHP2 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Petunia hybrida
Q75LR2 1.28e-139 415 47 5 446 2 DAHPS1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Oryza sativa subsp. japonica
A0A067XH53 4.85e-139 412 47 4 439 2 DAHP1 Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Petunia hybrida
P37822 1.31e-137 408 49 4 437 2 SHKB Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Solanum tuberosum
Q75W16 2.14e-136 406 47 5 439 2 DAHPS2 Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic Oryza sativa subsp. japonica
P37215 3.74e-136 404 48 4 437 2 None Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic Solanum lycopersicum
P80574 2.27e-135 400 45 2 435 1 aroH Phospho-2-dehydro-3-deoxyheptonate aldolase Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P80576 7.06e-120 362 43 7 457 1 aro-8 Phospho-2-dehydro-3-deoxyheptonate aldolase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
O53512 6.38e-108 330 41 5 429 1 aroG Phospho-2-dehydro-3-deoxyheptonate aldolase AroG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
A0R033 1.87e-106 327 40 5 431 3 aroG Phospho-2-dehydro-3-deoxyheptonate aldolase AroG Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)
A0MH68 5.09e-94 296 39 7 426 2 DHS1 Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic Catharanthus roseus
Q51789 1.54e-64 216 33 7 414 3 phzC Probable phospho-2-dehydro-3-deoxyheptonate aldolase Pseudomonas fluorescens
Q51517 4.8e-61 207 31 6 417 3 phzC Probable phospho-2-dehydro-3-deoxyheptonate aldolase Pseudomonas chlororaphis
P55911 7.86e-38 138 45 1 146 3 None Phospho-2-dehydro-3-deoxyheptonate aldolase (Fragment) Streptomyces lividans

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11710
Feature type CDS
Gene -
Product 3-deoxy-7-phosphoheptulonate synthase class II
Location 2586754 - 2588160 (strand: 1)
Length 1407 (nucleotides) / 468 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3825
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF01474 Class-II DAHP synthetase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3200 Amino acid transport and metabolism (E) E 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class II

Kegg Ortholog Annotation(s)

Protein Sequence

MFSTYNIDVLTEQNHQYLPIENTLSLQNIFSISWHPSLWKSLPAKQLPEYPDIHALNYCKEKLKHYPPLILASEIRAFKNLLKLVANGEAFLLQGGDCAESFDDCQATIIRDLTFTLSQMSALIEQSTGLPVIKLGRMAGQYAKPRSQAFETQNGLTLPSYRGEIINGLDFSVKSREPDPIRMITAYHHSAATLNLLRAMNYTQYTKQQWALDINAHPGSTEPEHYFHLLEQLYHSQHHIINKQPDTSSYYVSHEALLLHYEESMTRQDSIDNKWYNCSAHMVWVGERTTDIDHAHIEYLRGIENPIGIKCSTRMSGEKLIKLIDTLNPSNEVGKIILIIRVGKDAIHAYLPELVRTVKEHQRAVIWQIDPMHGNTQSANDSMKTRHFNDIAEETRAFIHILHEMGIQAGGIHLEMTGQEVTECTGGLQQIRYTDLSHGYQTLCDPRLNRTQSLELAFLVGRHWHNSL

Flanking regions ( +/- flanking 50bp)

AGGATCACCTCGCTTTTTCTATTCTTACTATAATCGCAGGAGCACTTTCTATGTTTAGTACCTATAATATTGATGTTTTAACAGAACAAAATCATCAATATTTACCAATAGAAAACACCCTATCATTACAGAATATATTTTCCATCTCTTGGCACCCATCATTATGGAAATCTTTACCCGCCAAGCAACTCCCTGAATACCCAGATATACATGCCTTAAATTATTGCAAAGAAAAGCTTAAGCATTATCCCCCGCTAATTTTAGCTTCCGAAATCAGAGCATTTAAAAATTTATTAAAACTTGTTGCAAATGGTGAAGCTTTTCTTCTGCAAGGAGGAGACTGTGCAGAATCTTTTGATGATTGCCAAGCCACTATTATCCGTGATTTAACATTCACTTTATCGCAAATGTCCGCATTAATTGAACAATCAACGGGATTGCCGGTGATTAAATTAGGTCGTATGGCTGGACAATACGCTAAACCTCGTAGCCAAGCATTTGAAACACAAAATGGCTTAACTTTACCCAGCTATCGAGGAGAAATTATTAATGGTCTTGATTTTTCAGTTAAAAGTAGAGAGCCAGATCCGATTAGAATGATAACTGCCTATCATCACTCAGCAGCGACCTTAAATCTGTTACGTGCGATGAATTATACACAATATACCAAGCAACAATGGGCCTTGGATATTAACGCTCATCCTGGCTCTACAGAGCCTGAGCATTATTTCCATTTGCTAGAACAACTCTATCATTCACAACACCATATTATTAATAAACAGCCCGATACCTCTTCCTATTATGTTAGTCATGAAGCTTTGTTACTGCATTATGAGGAATCGATGACTCGTCAAGATTCCATTGACAACAAATGGTATAACTGTTCAGCACATATGGTTTGGGTAGGAGAACGAACAACCGATATTGATCATGCCCATATCGAGTACCTACGAGGTATTGAAAACCCTATCGGTATAAAATGCAGCACCAGAATGTCTGGAGAAAAACTGATTAAGCTAATAGATACTCTTAACCCGAGCAATGAAGTTGGAAAAATTATCTTAATCATTCGCGTGGGTAAAGATGCTATTCATGCATATCTTCCGGAATTAGTAAGAACGGTAAAAGAACATCAACGAGCGGTTATTTGGCAAATAGATCCAATGCATGGCAATACACAATCAGCAAATGACAGTATGAAAACCCGACATTTCAATGATATTGCCGAAGAAACTCGTGCTTTTATTCATATTTTACATGAGATGGGCATACAGGCTGGGGGGATACATTTAGAAATGACCGGACAAGAAGTCACTGAATGTACTGGAGGATTACAACAAATTCGATACACTGACCTAAGTCATGGTTATCAAACTTTATGTGATCCTCGTCTTAACCGGACACAGTCATTAGAGTTAGCGTTCTTGGTTGGACGGCATTGGCATAATTCACTTTAATTGTAACCAAATATAAGTGCTTAGTACTTAAGCCAAGCACTTATCATTAC