Homologs in group_155

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09020 FBDBKF_09020 25.9 Morganella morganii S1 - Fimbrial protein
EHELCC_10390 EHELCC_10390 25.9 Morganella morganii S2 - Fimbrial protein
NLDBIP_10735 NLDBIP_10735 25.9 Morganella morganii S4 - Fimbrial protein
LHKJJB_10620 LHKJJB_10620 25.9 Morganella morganii S3 - Fimbrial protein
HKOGLL_13680 HKOGLL_13680 25.9 Morganella morganii S5 - Fimbrial protein
F4V73_RS10950 F4V73_RS10950 26.3 Morganella psychrotolerans - pilus assembly protein
PMI_RS01250 PMI_RS01250 34.1 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS01300 PMI_RS01300 31.1 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS09280 PMI_RS09280 32.2 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_155

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_155

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P08408 1.36e-32 117 38 4 174 1 papF Fimbrial adapter PapF Escherichia coli
P42187 5.15e-32 115 38 4 174 1 prsF Minor fimbrial protein PrsF Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10925
Feature type CDS
Gene -
Product fimbrial protein
Location 2406395 - 2406940 (strand: -1)
Length 546 (nucleotides) / 181 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_155
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12521 minor pilin subunit PapF - -

Protein Sequence

MNKSKYFILPIFLYLLSGTARAVDINIAITGAIYVPPCVVNNNIPIQFSFNQIMTYKVDGQTSAITKNIPITCTYFKGSPYVKVSGIQLAGAPDNVLKVSADSVNSNRFGLALYQGESVDENNPLRLNGSAPRGYAITKGFSNTGQDRSQFTITAVPFKTGTADLSPGNFTASASLSIVYN

Flanking regions ( +/- flanking 50bp)

AAGTGTTGTACCTGGAGTTTATAATGCCACGGTAGAATTTGAGGTTTCTTATGAATAAAAGTAAATATTTTATACTGCCTATTTTTTTATATTTACTATCAGGAACTGCACGGGCAGTTGATATAAATATAGCTATTACAGGCGCTATTTATGTTCCACCTTGTGTTGTTAATAATAATATCCCTATACAGTTTTCTTTTAATCAAATAATGACTTATAAAGTCGATGGTCAAACAAGCGCTATCACAAAAAATATTCCTATTACATGTACTTATTTTAAGGGCTCACCTTACGTCAAAGTATCTGGCATTCAGTTAGCTGGAGCGCCTGATAATGTGCTTAAAGTTTCCGCAGATAGCGTGAATTCAAATCGATTTGGCCTTGCCTTATATCAAGGAGAGAGTGTTGATGAGAATAATCCTTTGCGTTTGAATGGTTCAGCCCCTCGAGGTTATGCCATTACAAAAGGTTTTTCTAATACAGGGCAAGACAGGAGCCAATTTACTATTACTGCTGTTCCTTTTAAAACAGGTACTGCTGATTTATCTCCTGGAAATTTTACGGCCTCCGCATCATTAAGCATTGTTTATAACTAAACCTAAAACAGAGTCAATGATGAGTATCAGAGACTGAGGTTTATGTAATC