Homologs in group_275

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05755 FBDBKF_05755 32.5 Morganella morganii S1 punR DNA-binding transcriptional activator PunR
EHELCC_11835 EHELCC_11835 32.5 Morganella morganii S2 punR DNA-binding transcriptional activator PunR
NLDBIP_12175 NLDBIP_12175 32.5 Morganella morganii S4 punR DNA-binding transcriptional activator PunR
LHKJJB_12035 LHKJJB_12035 32.5 Morganella morganii S3 punR DNA-binding transcriptional activator PunR
HKOGLL_10650 HKOGLL_10650 32.5 Morganella morganii S5 punR DNA-binding transcriptional activator PunR
F4V73_RS03570 F4V73_RS03570 31.5 Morganella psychrotolerans punR DNA-binding transcriptional activator PunR
PMI_RS06760 PMI_RS06760 30.2 Proteus mirabilis HI4320 punR DNA-binding transcriptional activator PunR

Distribution of the homologs in the orthogroup group_275

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_275

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACR0 5.93e-128 370 58 0 301 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 5.93e-128 370 58 0 301 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
Q8FK66 1.56e-126 366 57 0 301 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 1.56e-126 366 57 0 301 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RF30 2.52e-126 365 57 0 301 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 2.52e-126 365 57 0 301 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
Q9S4Y7 7.72e-121 352 54 0 304 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 7.72e-121 352 54 0 304 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z8R3 4.79e-120 349 54 0 304 3 allS HTH-type transcriptional activator AllS Salmonella typhi
Q57S50 6.39e-120 350 54 0 304 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
Q765S2 4.53e-115 335 58 0 261 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P77700 2.49e-61 200 35 0 289 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P0ACR2 1.26e-45 159 32 2 276 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 1.26e-45 159 32 2 276 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
P76369 2.41e-31 122 27 1 270 3 yeeY Uncharacterized HTH-type transcriptional regulator YeeY Escherichia coli (strain K12)
P67660 2.79e-16 80 25 6 298 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 2.79e-16 80 25 6 298 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
P52696 5.65e-15 77 25 7 244 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P75836 1.09e-12 70 27 5 254 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P27111 4.76e-12 68 28 5 203 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P94387 6.42e-12 68 31 1 128 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P77744 8.3e-12 68 25 2 189 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
Q8X4M5 1.27e-11 67 27 5 203 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
A1JI47 6.04e-11 65 44 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P0DUU5 6.41e-11 65 25 9 295 1 aceR HTH-type transcriptional regulator AceR Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
Q47005 8.83e-11 65 23 4 251 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
B1JQ39 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 1.52e-10 64 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P96194 2.18e-10 61 34 0 99 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
A0T0G2 2.47e-10 63 26 4 192 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
A0A0H2ZDG9 3.74e-10 63 31 3 125 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
A0T0V5 4.28e-10 63 27 5 187 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
B2TU26 5.25e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q3YVK2 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 5.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7NU32 5.77e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q329U3 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 5.99e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NF72 6.05e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B4SYF7 6.29e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
Q1R4H3 6.34e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 6.34e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 6.34e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 6.34e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 6.34e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B4TNR5 6.41e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B5FN59 6.41e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
B7LUJ5 6.46e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
P0A2Q0 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 6.72e-10 62 43 0 65 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
P39647 9.01e-10 62 27 6 181 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P0A9G1 1.45e-09 61 23 3 189 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 1.45e-09 61 23 3 189 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 1.45e-09 61 23 3 189 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P39592 1.54e-09 61 26 4 183 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
P0ACR8 2.51e-09 60 23 7 288 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 2.51e-09 60 23 7 288 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P52669 2.52e-09 60 24 4 206 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P23841 2.55e-09 60 32 1 104 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
O06703 3.39e-09 60 26 2 152 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P77559 4.34e-09 60 25 2 175 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P48271 6.32e-09 59 24 8 218 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P70785 6.44e-09 59 44 0 67 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P52690 6.78e-09 59 26 8 264 3 cbbR HTH-type transcriptional regulator CbbR Cereibacter sphaeroides
A7Z5E4 7.04e-09 59 25 8 276 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q08597 7.11e-09 59 23 4 251 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
Q04778 8.81e-09 59 32 3 122 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P37641 9.77e-09 58 32 0 92 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
P42427 1.08e-08 58 30 0 91 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q57748 1.28e-08 58 28 5 175 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0A2Q4 1.5e-08 58 23 4 192 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 1.5e-08 58 23 4 192 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P77309 1.74e-08 58 23 8 259 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P94403 1.82e-08 58 25 3 155 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P52665 2.94e-08 55 46 0 63 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
Q85G62 3.09e-08 57 24 5 199 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P77333 3.32e-08 57 25 9 257 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P96725 3.36e-08 57 22 11 307 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
Q9JPU9 4.58e-08 57 33 0 81 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P25544 4.66e-08 57 27 7 194 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q9JXW7 4.76e-08 57 33 0 81 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P0A2Q2 5.3e-08 56 40 0 64 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 5.3e-08 56 40 0 64 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P05827 5.51e-08 56 40 0 64 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
Q1XDT2 6.35e-08 56 23 7 216 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P51205 7.02e-08 56 23 7 216 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
Q6B936 1.06e-07 55 24 9 221 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
Q9X5P2 1.3e-07 55 26 3 137 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
O68014 1.39e-07 55 32 2 98 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P73123 1.76e-07 55 25 7 198 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P20668 2.49e-07 54 24 4 194 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
O34685 3.18e-07 54 39 0 71 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
P52666 3.51e-07 54 26 4 186 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P55576 4.73e-07 53 46 0 60 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q01610 5.27e-07 53 24 8 261 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P30864 5.68e-07 53 26 3 128 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
O33945 6.6e-07 53 35 0 78 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
Q1R6S1 6.99e-07 53 25 5 170 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 6.99e-07 53 25 5 170 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TD46 6.99e-07 53 25 5 170 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P45463 7.32e-07 53 25 5 170 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
Q06610 8.44e-07 53 35 1 85 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P42722 9.98e-07 53 26 4 180 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q47141 1.01e-06 52 41 0 63 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
P45105 1.08e-06 53 24 6 170 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P49518 1.17e-06 52 25 5 182 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P0A9F6 1.3e-06 52 45 1 62 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 1.3e-06 52 45 1 62 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 1.3e-06 52 45 1 62 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
Q9I6Z9 1.3e-06 52 24 4 155 3 bauR HTH-type transcriptional activator BauR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P16931 1.33e-06 52 36 0 65 3 dgdR HTH-type transcriptional regulator DgdR Burkholderia cepacia
O19892 1.44e-06 52 24 8 205 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P52659 2.21e-06 52 38 0 67 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
P39127 2.21e-06 52 20 3 259 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
A4QH19 2.61e-06 51 27 2 125 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P34818 2.92e-06 51 36 0 82 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
Q05840 3.33e-06 51 37 0 72 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
Q8XBK9 4.03e-06 51 24 5 170 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P0A9F3 4.08e-06 51 21 5 185 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 4.08e-06 51 21 5 185 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 4.08e-06 51 21 5 185 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P55181 4.09e-06 51 27 0 98 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
P44821 4.14e-06 50 26 3 128 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q5N5I5 4.62e-06 51 22 3 179 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 4.62e-06 51 22 3 179 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q46M57 4.64e-06 50 35 0 67 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P52693 4.73e-06 50 24 6 187 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q46M54 5.13e-06 50 35 0 67 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
O07906 5.58e-06 50 24 1 110 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
P06614 5.81e-06 50 23 4 169 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O35038 6.03e-06 50 33 2 87 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
P0ACQ9 6.12e-06 50 22 5 286 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 6.12e-06 50 22 5 286 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 6.12e-06 50 22 5 286 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P43011 6.37e-06 50 27 7 178 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52662 6.85e-06 50 37 0 72 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
Q8KA72 7.89e-06 50 23 5 192 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P67662 8.17e-06 50 35 0 64 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 8.17e-06 50 35 0 64 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 8.17e-06 50 35 0 64 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P11720 8.17e-06 50 34 0 82 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P24734 9.24e-06 50 46 0 60 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
B4E8V9 1.03e-05 50 24 6 186 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
P52044 1.04e-05 49 24 5 201 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
P52677 1.1e-05 49 41 0 60 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
P33651 1.11e-05 50 33 0 66 3 blaA HTH-type transcriptional regulator BlaA Streptomyces cacaoi
Q55459 1.42e-05 49 25 4 176 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P37499 1.66e-05 49 25 7 195 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
O87883 1.68e-05 48 21 2 175 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
Q8VWE6 1.87e-05 49 38 0 70 3 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli O157:H7
P36771 1.99e-05 48 38 0 70 1 lrhA Probable HTH-type transcriptional regulator LrhA Escherichia coli (strain K12)
Q44311 2.32e-05 48 22 7 249 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
P46068 2.49e-05 48 47 0 57 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P45600 2.57e-05 48 23 8 203 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P45099 2.76e-05 48 43 0 57 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57083 2.79e-05 48 40 0 62 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P07774 3.07e-05 48 37 0 67 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q9HWH8 3.54e-05 48 22 9 258 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0A4T7 4.1e-05 48 34 1 70 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 4.1e-05 48 34 1 70 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P45461 4.47e-05 47 46 0 60 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
P39376 4.66e-05 47 29 0 88 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
P52676 5.33e-05 47 41 0 60 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P05051 5.34e-05 47 46 0 60 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
O33812 6.66e-05 47 25 2 175 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
Q8YQ82 6.94e-05 47 23 8 202 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P71025 7.13e-05 47 25 1 120 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
P12529 7.83e-05 47 45 0 60 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P77171 9.66e-05 47 23 1 173 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P76250 0.000109 46 40 0 61 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P0C6D1 0.000113 46 28 0 99 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0ACQ4 0.000119 46 25 3 120 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 0.000119 46 25 3 120 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 0.000119 46 25 3 120 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
A5F9F9 0.00012 46 28 0 99 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P67668 0.000143 46 41 0 58 3 BQ2027_MB2303C Uncharacterized HTH-type transcriptional regulator Mb2303c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMF3 0.000143 46 41 0 58 1 Rv2282c Uncharacterized HTH-type transcriptional regulator Rv2282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF2 0.000143 46 41 0 58 3 MT2340 Uncharacterized HTH-type transcriptional regulator MT2340 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q9X725 0.000184 46 25 3 120 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P71318 0.000192 45 25 3 120 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
P52689 0.000195 45 34 0 64 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
Q3MCB5 0.00021 45 23 8 202 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
O34827 0.000232 45 19 2 151 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P03030 0.000235 45 23 11 257 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P52683 0.000235 45 41 0 60 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
O78432 0.000259 45 20 5 199 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
Q9I4X0 0.000303 45 25 6 183 1 mvfR Multiple virulence factor regulator MvfR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P70773 0.000353 45 38 1 70 3 argP HTH-type transcriptional regulator ArgP Aeromonas salmonicida
P94501 0.000393 45 28 0 76 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P33634 0.000403 45 20 9 264 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P52675 0.000614 42 35 2 67 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
P20667 0.000631 44 38 1 62 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
O32186 0.000836 43 27 2 122 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
P9WMF5 0.000849 43 34 3 99 1 lysG HTH-type transcriptional regulator LysG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF4 0.000849 43 34 3 99 3 lysG HTH-type transcriptional regulator LysG Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P67666 0.000849 43 34 3 99 3 lysG HTH-type transcriptional regulator LysG Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P94678 0.000852 43 19 1 179 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10825
Feature type CDS
Gene allS
Product HTH-type transcriptional activator AllS
Location 2384601 - 2385515 (strand: 1)
Length 915 (nucleotides) / 304 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_275
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10972 LysR family transcriptional regulator, transcriptional activator of the allD operon - -

Protein Sequence

MLDQEMIRTFIQVADCQSFTKAAEMLHKTSAAISYRIKTLEENIGTQLFNRTTRTVTLTPAGEYLLEKCRQWIVWLESMPIELQQMNAGVEHQVNIVINNLLYDRTAVASMLACLHQRFPSTQFHITRQVYMGVWDALINEDYHFAIGVTGNESLKNNINICAMGEIQWQFVVAPNHPLANVSGVLSDDQMRIYSAVNVEDTSRHLSKRTAWRLSGQHEIKVPDLHTKLACHLKGVGIGFLPLSLCKPLIDSGQLIAKEVKNRRHNSPLSLAWCEDKKGAVVSYLVDLFRQGHPSVQSFYDPLN

Flanking regions ( +/- flanking 50bp)

ACCATACACATTATGTGACTTTTACCTCTTTCACCATCAGGAAAAAGAATATGTTAGATCAAGAGATGATCCGTACTTTTATTCAAGTAGCAGATTGCCAAAGCTTTACTAAAGCGGCGGAGATGTTACACAAAACATCTGCGGCCATCAGCTATCGGATCAAAACCCTAGAAGAGAATATTGGTACACAGTTGTTTAATCGTACGACAAGAACCGTCACATTAACGCCGGCAGGGGAATATTTATTAGAGAAATGTCGCCAGTGGATTGTTTGGCTTGAATCAATGCCTATCGAGCTACAGCAGATGAATGCGGGAGTTGAGCACCAAGTTAATATTGTTATTAATAACTTACTCTATGATCGTACCGCCGTGGCCAGTATGTTAGCCTGCCTGCACCAGCGTTTTCCTTCTACCCAATTTCATATTACTCGACAAGTTTATATGGGAGTATGGGACGCGTTAATTAATGAAGATTACCATTTTGCCATTGGTGTCACAGGTAATGAATCACTGAAAAATAATATTAATATTTGTGCTATGGGGGAAATTCAATGGCAATTTGTCGTGGCACCAAATCATCCATTAGCCAATGTTAGTGGGGTATTAAGTGATGATCAAATGCGGATATACTCTGCCGTCAATGTTGAAGATACTTCACGCCATCTTTCCAAACGCACCGCTTGGCGTCTATCTGGACAACATGAAATTAAAGTGCCTGATTTACATACTAAACTAGCATGTCATTTAAAAGGTGTCGGGATCGGTTTTTTACCATTAAGTCTATGTAAGCCACTGATTGATAGTGGACAACTTATTGCAAAGGAAGTGAAAAATCGTCGCCATAATTCTCCCCTATCACTAGCTTGGTGCGAAGATAAAAAAGGTGCCGTTGTCAGCTATCTGGTTGATTTGTTCCGACAAGGGCATCCCAGTGTGCAATCTTTTTACGATCCCCTTAACTAAAAAAGGCAAACCGAAGTTTGCCCTTGTTGATAACATTAAACTTAATGCGT