Homologs in group_215

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16500 FBDBKF_16500 25.5 Morganella morganii S1 - Acid phosphatase
EHELCC_08365 EHELCC_08365 25.5 Morganella morganii S2 - Acid phosphatase
NLDBIP_08690 NLDBIP_08690 25.5 Morganella morganii S4 - Acid phosphatase
LHKJJB_05575 LHKJJB_05575 25.5 Morganella morganii S3 - Acid phosphatase
HKOGLL_05340 HKOGLL_05340 25.5 Morganella morganii S5 - Acid phosphatase
F4V73_RS03015 F4V73_RS03015 24.9 Morganella psychrotolerans - phosphatase PAP2 family protein
PMI_RS04145 PMI_RS04145 20.9 Proteus mirabilis HI4320 - autotransporter domain-containing protein
PMI_RS11580 PMI_RS11580 30.1 Proteus mirabilis HI4320 pta autotransporter Pta

Distribution of the homologs in the orthogroup group_215

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_215

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q52657 2.9e-06 54 26 10 222 3 ompA Outer membrane protein A Rickettsia conorii (strain ATCC VR-613 / Malish 7)
O06653 3.18e-06 54 25 7 185 3 ompB Outer membrane protein B Rickettsia japonica (strain ATCC VR-1363 / YH)
Q53020 1.45e-05 52 23 5 186 1 ompB Outer membrane protein B Rickettsia prowazekii (strain Madrid E)
Q53047 3.68e-05 51 24 7 185 1 ompB Outer membrane protein B Rickettsia rickettsii
Q9KKA3 3.74e-05 51 24 7 185 1 ompB Outer membrane protein B Rickettsia conorii (strain ATCC VR-613 / Malish 7)
P15921 8.17e-05 50 25 10 222 3 ompA Outer membrane protein A Rickettsia rickettsii
P96989 0.000866 46 21 5 183 1 ompB Outer membrane protein B Rickettsia typhi (strain ATCC VR-144 / Wilmington)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10480
Feature type CDS
Gene -
Product autotransporter outer membrane beta-barrel domain-containing protein
Location 2301662 - 2303827 (strand: 1)
Length 2166 (nucleotides) / 721 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_215
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF03797 Autotransporter beta-domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4625 Function unknown (S) S Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain

Protein Sequence

MKNKNLLFLSAAVLSAIYGSAVAADCDSTLTICETVNINNGDTAQINKDVNVSQGDGVVFNGSSTEYKAQAITKNITVTGNGANAIKINQGATFSSNINLNGANVTSENGTAILVEGNFPKRGTGVYIRDGAIIRGKTAAIDFSTLKTGFRSDVNGEIHGDILGNNHVDTKINFAYQGGAQNALFDGYKITGVPLIENHGNLTIQGKDKTIQWEGNFMNKENSQLIFRLDDNTNTDETILHVTGDVTFKKGSQAKLDFKGTSVDNIINKDIVLIASDSAIKDEAGITVTDANAIAPDISPLLEKTDSWLETTPPNISGGVSGNQLIARYGISYEGGDNFISAAERGNVTENGLAAANFIIPTVLNEFNNTRSQISDEALSLLVAAGNNDNNIAALSNDLAPIADGSDIQAGLIMVEDMRNNIAHRYLRYDNQLPIEEREIGWNSWANILYGYGTQSQQGGINGYNTYRTGIQIGTDYEINQDALIGISLAYNYAKADAKQRNASKEISHFEFMPYAGWYSDTLFLNGNLNIGYYTVDSERDIGGNTGWQGNTKAKGDYSGVQLGYQINAGTYLDFDFIHIKPMLTYQYQWLNIDSWEETGSTLSMRTYGQRYAVNQLGGSVALWNDYQTSYGKLTPSLNLRYIKDIAGNNDINQRHSLTYFNTGGSTFDIKGNTVGGDIISAELGANLDITQSLNLGTTMGYQRYDKFNEGRIGFTVSQRF

Flanking regions ( +/- flanking 50bp)

AGCAACTTTCTAATAATTAAAACCATATAATAGTCATAAGGTTATATCTCATGAAAAATAAAAATTTGTTATTTTTAAGTGCTGCTGTCCTTTCAGCTATATATGGCTCAGCCGTAGCGGCTGATTGCGATAGTACTTTAACCATTTGTGAAACCGTAAACATTAATAATGGCGATACAGCGCAAATAAATAAAGATGTTAATGTATCACAAGGTGACGGTGTAGTATTTAATGGCTCATCAACAGAATATAAAGCTCAAGCAATTACAAAAAATATTACTGTTACTGGTAATGGAGCAAATGCAATTAAAATAAATCAGGGAGCTACTTTTAGTAGTAATATTAATTTAAATGGCGCTAACGTTACTAGTGAAAATGGTACAGCAATATTAGTTGAAGGTAACTTTCCTAAACGAGGAACAGGTGTTTATATCCGAGATGGCGCTATTATCAGAGGAAAAACCGCAGCGATTGATTTTAGCACTTTAAAAACAGGCTTTAGAAGTGATGTTAATGGCGAGATCCACGGTGATATTTTAGGGAATAATCATGTGGATACCAAAATCAATTTTGCTTATCAGGGAGGAGCACAAAATGCATTATTTGACGGCTATAAAATTACCGGTGTTCCTTTAATTGAAAACCATGGCAATTTAACTATCCAAGGTAAAGATAAAACCATTCAATGGGAAGGTAACTTCATGAATAAGGAAAATAGCCAGCTTATTTTCCGCCTTGATGATAATACCAATACTGATGAAACTATCTTACATGTTACCGGCGATGTCACCTTTAAAAAAGGTAGCCAAGCAAAACTTGATTTTAAAGGCACCAGTGTTGATAACATCATTAATAAAGATATTGTATTAATTGCTTCAGACTCGGCAATTAAAGATGAAGCGGGCATTACAGTGACTGATGCAAATGCCATAGCGCCAGATATTTCACCTTTATTAGAAAAAACCGATTCATGGTTAGAAACGACACCACCAAATATTAGCGGTGGTGTCAGTGGTAATCAATTAATTGCGCGTTATGGTATTAGCTACGAAGGGGGGGATAATTTTATTAGCGCTGCTGAACGTGGCAATGTCACAGAGAATGGATTAGCAGCAGCTAATTTTATTATTCCAACAGTATTAAATGAATTTAATAATACACGTAGCCAAATTTCAGATGAAGCATTAAGTTTATTAGTCGCCGCTGGTAATAATGATAATAATATTGCTGCACTATCAAATGATCTGGCGCCCATTGCTGATGGTAGTGATATTCAAGCAGGATTAATCATGGTTGAAGATATGCGCAACAATATTGCTCATCGCTACTTACGCTATGATAATCAGCTCCCCATTGAAGAAAGAGAAATAGGTTGGAATAGCTGGGCAAATATTCTGTACGGTTATGGTACGCAAAGTCAACAAGGTGGAATTAACGGCTACAATACTTATCGCACTGGTATTCAAATCGGTACTGATTATGAAATAAATCAAGATGCGCTAATTGGCATTTCTTTAGCATATAACTACGCTAAAGCCGATGCTAAACAACGTAATGCAAGCAAAGAAATTAGCCATTTTGAATTTATGCCTTATGCCGGTTGGTATAGTGATACATTATTCTTAAACGGTAATTTAAATATTGGTTATTACACTGTCGATAGTGAGAGGGATATTGGTGGTAATACGGGATGGCAAGGAAATACCAAAGCAAAAGGTGACTACTCTGGTGTGCAATTAGGCTATCAGATTAACGCTGGCACCTATTTGGATTTTGATTTTATCCATATTAAACCGATGCTAACTTACCAATATCAATGGCTCAATATTGATTCTTGGGAAGAAACAGGCTCTACATTATCTATGCGTACTTATGGCCAACGCTACGCAGTTAATCAATTAGGTGGCTCTGTTGCTTTATGGAATGACTACCAAACCTCTTATGGCAAATTAACCCCTTCTCTTAACCTTCGTTATATCAAAGATATTGCAGGTAATAACGATATTAATCAACGCCACAGCCTTACCTATTTTAATACTGGAGGAAGCACCTTCGATATTAAAGGAAATACCGTTGGTGGTGACATCATTAGTGCTGAATTAGGTGCAAACCTTGATATTACCCAATCGTTAAATTTAGGTACAACAATGGGATATCAGCGTTATGACAAATTCAATGAAGGGCGTATCGGCTTTACTGTTAGCCAGCGTTTCTAAGGAGAAAATATAATGCCGATATTTCGTTTTACTGCGCTTGCAATGACATT