Homologs in group_3833

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS06175 F4V73_RS06175 54.4 Morganella psychrotolerans - phage holin family protein

Distribution of the homologs in the orthogroup group_3833

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3833

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q3T4L9 1.49e-05 43 27 0 90 3 XXXV Holin Enterobacteria phage PRD1

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09795
Feature type CDS
Gene -
Product phage holin family protein
Location 2131162 - 2131476 (strand: -1)
Length 315 (nucleotides) / 104 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3833
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF16083 LydA holin phage, holin superfamily III

Protein Sequence

MKKMPYKDPNNMNWFTALLIAGMAVFGGIASYANKIVKGEPFRFAILFAQIVVSMFSGALILFGASYYQWQPEIAGAIAGMAGWSGAALVSALEKRFLRKVSGE

Flanking regions ( +/- flanking 50bp)

CACCACACCGATTTTACAACTTTGGGATTAACCCCTTTAAGGGGGAAGGTATGAAGAAGATGCCCTATAAAGATCCAAATAATATGAATTGGTTTACTGCCTTATTAATTGCCGGTATGGCGGTTTTTGGTGGTATTGCCAGTTATGCCAATAAAATAGTGAAAGGGGAACCGTTCCGCTTTGCCATCTTATTTGCACAAATTGTTGTCTCTATGTTTTCAGGGGCATTGATTTTATTCGGTGCAAGTTATTACCAGTGGCAACCTGAAATTGCCGGCGCTATTGCCGGTATGGCGGGCTGGTCTGGTGCTGCATTGGTCAGTGCGTTAGAAAAAAGATTCTTAAGGAAGGTCTCTGGTGAATAAATTTATCTTTAGCCAGCGCAGTAAAAATAATCTTAGTGGCGTTAATCCGC