Homologs in group_571

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01500 FBDBKF_01500 72.7 Morganella morganii S1 recN DNA repair protein RecN
EHELCC_00045 EHELCC_00045 72.7 Morganella morganii S2 recN DNA repair protein RecN
NLDBIP_03415 NLDBIP_03415 72.7 Morganella morganii S4 recN DNA repair protein RecN
LHKJJB_04930 LHKJJB_04930 72.7 Morganella morganii S3 recN DNA repair protein RecN
HKOGLL_02115 HKOGLL_02115 72.7 Morganella morganii S5 recN DNA repair protein RecN
F4V73_RS01905 F4V73_RS01905 72.3 Morganella psychrotolerans recN DNA repair protein RecN

Distribution of the homologs in the orthogroup group_571

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_571

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P05824 0.0 790 70 0 553 1 recN DNA repair protein RecN Escherichia coli (strain K12)
P0C6Q4 0.0 558 51 0 553 3 recN DNA repair protein RecN Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F379 0.0 558 51 0 553 3 recN DNA repair protein RecN Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P44496 3.51e-172 501 49 1 554 3 recN DNA repair protein RecN Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9PB02 3.52e-109 340 38 4 553 3 recN DNA repair protein RecN Xylella fastidiosa (strain 9a5c)
Q87BS5 1.43e-108 338 38 4 553 3 recN DNA repair protein RecN Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9K974 1.65e-90 291 34 7 561 3 recN DNA repair protein RecN Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P17894 2.67e-88 286 32 7 571 3 recN DNA repair protein RecN Bacillus subtilis (strain 168)
Q9S220 2.55e-79 263 31 8 569 3 recN DNA repair protein RecN Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q92J40 2.08e-74 249 31 7 556 3 recN DNA repair protein RecN Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UKJ1 3.67e-71 240 31 9 566 3 recN DNA repair protein RecN Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RHI2 3.37e-70 238 31 9 560 3 recN DNA repair protein RecN Rickettsia bellii (strain RML369-C)
Q9WXF2 5.02e-67 230 31 8 554 1 recN DNA repair protein RecN Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051 / NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)
Q68XI5 5.69e-67 229 29 9 565 3 recN DNA repair protein RecN Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O83456 3.76e-65 225 29 7 567 3 recN DNA repair protein RecN Treponema pallidum (strain Nichols)
Q9ZDY2 1.23e-64 223 30 11 566 3 recN DNA repair protein RecN Rickettsia prowazekii (strain Madrid E)
P74374 5.61e-61 214 31 13 578 3 recN DNA repair protein RecN Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q49896 1.74e-56 202 28 10 592 3 recN DNA repair protein RecN Mycobacterium leprae (strain TN)
P9WHI7 5.49e-54 195 27 11 592 1 recN DNA repair protein RecN Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P0A5U7 5.49e-54 195 27 11 592 3 recN DNA repair protein RecN Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WHI6 5.61e-54 195 27 11 592 3 recN DNA repair protein RecN Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O66834 1.21e-41 160 25 12 559 3 recN DNA repair protein RecN Aquifex aeolicus (strain VF5)
Q9PHM5 1.31e-18 92 23 17 568 3 recN DNA repair protein RecN Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
O25943 1.94e-13 76 23 20 565 3 recN DNA repair protein RecN Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZJ80 1e-12 74 22 20 563 3 recN DNA repair protein RecN Helicobacter pylori (strain J99 / ATCC 700824)
P47540 1.31e-06 55 27 8 235 3 smc Chromosome partition protein Smc Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75361 4.17e-05 50 30 2 112 3 smc Chromosome partition protein Smc Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q8TZY2 0.00059 46 32 4 108 1 smc Chromosome partition protein Smc Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
O93309 0.000593 46 22 8 278 1 smc3 Structural maintenance of chromosomes protein 3 Xenopus laevis
Q81ZL2 0.000795 46 30 4 106 3 smc Chromosome partition protein Smc Coxiella burnetii (strain RSA 493 / Nine Mile phase I)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09385
Feature type CDS
Gene recN
Product DNA repair protein RecN
Location 2047215 - 2048876 (strand: 1)
Length 1662 (nucleotides) / 553 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_571
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02463 RecF/RecN/SMC N terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0497 Replication, recombination and repair (L) L DNA repair ATPase RecN

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03631 DNA repair protein RecN (Recombination protein N) - -

Protein Sequence

MLTQLTISHFAIVRELEIDFSGGMTTITGETGAGKSIAIDALGLCLGNRGDANMVRPGATRADLCARFSLSDTPSAQRWLEEHHLDDHNECLLRRTIAADGRSRGFINGTSVPLSQLRELGSLLIQIHGQHAHQQLLEPRYQKHLLDIYANEPALLKKMKAAYQTWHQSCQTLATFQQQSLEREARQQLIDYHLKELNEFQPVAGEYPELDQEYKRLSNCGQFLTLSQNSLQILSDNEEQNILSMLNVAKHEISELSTMESQFNSLLDMLEEASIQISEVSDELRHYSDRLEMDPNRLFELEKHISKYISLSRKHRVTPEELYELHQQLIEEKEALLRQNDDCDALMEQVKIDHAAALDVAKQLHQIRQQYAHELSQLITNSMHQLSMPHGYLTVDTLFDENVLQIDGATKVEFNVTTNPGQPHQALSKVASGGELSRIALAIQVITAKKMDTPALIFDEVDVGISGPTAAIVGKLLRELGESTQVMCVTHLPQVAGCGHQHYFVNKETNGEETETTMKLLTKKERLQELARLLAGSEVTKNTLANAKDLLAA

Flanking regions ( +/- flanking 50bp)

AGTTTATACTGTATGTAATTACAGATATGTTTTTATACAGGAGAGGCACTATGCTGACTCAATTAACTATTAGTCATTTTGCCATAGTCCGTGAACTTGAAATCGACTTTTCTGGTGGCATGACCACAATTACCGGTGAAACGGGCGCAGGTAAATCTATTGCGATTGACGCATTAGGCTTGTGTTTAGGAAACCGTGGTGATGCTAATATGGTTCGCCCTGGTGCCACTAGAGCGGATTTATGCGCACGATTTTCACTCTCTGATACCCCTTCCGCCCAGCGTTGGTTAGAAGAACATCATCTTGACGATCATAACGAATGCCTATTAAGAAGAACCATTGCAGCAGATGGCCGCTCTCGTGGTTTTATTAATGGTACTTCTGTCCCTTTGTCTCAACTAAGAGAGCTTGGCTCATTGCTGATCCAAATTCATGGGCAACATGCTCATCAACAACTGTTAGAGCCTCGCTACCAAAAACATTTACTTGATATCTATGCTAATGAACCTGCTTTATTAAAAAAGATGAAAGCGGCTTATCAAACCTGGCATCAGAGTTGCCAAACCTTAGCGACTTTTCAACAACAATCTTTAGAAAGAGAAGCAAGGCAACAACTGATTGATTATCACTTAAAAGAGCTTAACGAGTTCCAACCTGTCGCGGGGGAATACCCTGAATTAGATCAAGAATATAAAAGGTTATCTAATTGTGGTCAATTTCTGACCTTGAGCCAAAATAGTTTACAGATCTTAAGTGATAACGAAGAACAAAATATTTTAAGTATGCTGAATGTGGCCAAACATGAGATCAGCGAACTTTCCACAATGGAGAGCCAATTTAATTCACTGTTAGATATGCTGGAAGAAGCAAGTATTCAAATTAGCGAAGTGAGTGATGAACTACGCCACTACAGTGATCGTTTAGAAATGGATCCTAACCGTTTATTCGAATTAGAAAAACATATTTCCAAATATATTAGTCTATCTCGTAAACATCGTGTCACCCCTGAAGAGCTATATGAATTGCATCAACAATTAATTGAAGAAAAAGAGGCACTATTACGCCAAAATGATGACTGTGATGCATTAATGGAACAAGTTAAAATTGATCATGCAGCTGCATTGGACGTGGCAAAACAACTTCATCAAATTCGTCAACAGTATGCACACGAATTAAGCCAGTTGATTACCAATAGCATGCATCAATTATCAATGCCTCATGGCTATTTAACTGTAGATACATTGTTTGATGAAAATGTCTTACAAATTGATGGTGCGACAAAAGTTGAGTTCAATGTCACCACCAACCCGGGGCAACCTCATCAAGCTCTCTCTAAAGTTGCATCTGGCGGTGAGCTATCACGTATCGCTCTTGCTATCCAAGTGATCACCGCAAAAAAAATGGATACACCCGCGCTGATTTTTGATGAAGTGGATGTTGGTATTAGTGGACCAACAGCAGCTATTGTCGGTAAATTATTGCGTGAATTAGGCGAATCGACACAAGTTATGTGTGTTACTCACCTACCGCAAGTAGCAGGTTGTGGTCATCAACACTATTTTGTTAATAAAGAGACTAATGGTGAAGAGACAGAAACCACCATGAAGCTGTTAACTAAAAAAGAGCGTTTACAGGAGTTAGCCCGCTTATTAGCAGGAAGTGAAGTGACTAAAAACACCCTTGCTAACGCAAAAGATCTGCTGGCAGCCTAACGATTAACAAACTTTTATCGATATTTAGGGTCTTAGGCAGAGCGTGAAAG