Homologs in group_1912

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14245 FBDBKF_14245 61.5 Morganella morganii S1 dedD cell division protein DedD
EHELCC_08035 EHELCC_08035 61.5 Morganella morganii S2 dedD cell division protein DedD
NLDBIP_08360 NLDBIP_08360 61.5 Morganella morganii S4 dedD cell division protein DedD
LHKJJB_05905 LHKJJB_05905 61.5 Morganella morganii S3 dedD cell division protein DedD
HKOGLL_05010 HKOGLL_05010 61.5 Morganella morganii S5 dedD cell division protein DedD
F4V73_RS02665 F4V73_RS02665 63.4 Morganella psychrotolerans dedD cell division protein DedD

Distribution of the homologs in the orthogroup group_1912

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1912

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09549 1.68e-49 163 42 3 233 1 dedD Cell division protein DedD Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08755
Feature type CDS
Gene dedD
Product cell division protein DedD
Location 1915052 - 1915690 (strand: -1)
Length 639 (nucleotides) / 212 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1912
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05036 SPOR domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3147 Cell cycle control, cell division, chromosome partitioning (D) D Cell division protein DedD (periplasmic protein involved in septation)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03749 DedD protein - -

Protein Sequence

MASKFQNRLVGAVVLVAVGVIFLPTLFDGDKKYNEDQFASIPLVPKPGDEQDIESIAPIEQTTTPSTPSEGASEAMISEAVTGVEQPQVSTPEVSEPQVAPSTPVVEPPKVVNPPVEPPTTPPPAVSETTAPKGEAWVVQLGALKNAAKVEEIIAKMHLSGYPVYTVPARPVSGKVTRIYIGPNASKAELQAMLPRLKELTGLQGEVRAYKP

Flanking regions ( +/- flanking 50bp)

ATTCCATACCGTTGCTCATGTAATGGAACTATTGGAAAAGGAGAGTGCGAGTGGCAAGTAAATTTCAAAATCGCTTAGTCGGAGCCGTTGTTCTTGTGGCGGTAGGGGTTATTTTTCTTCCTACATTATTTGACGGCGATAAGAAATATAACGAAGACCAATTTGCCTCTATTCCTTTAGTCCCCAAACCCGGTGATGAGCAAGATATTGAATCAATAGCGCCGATTGAGCAAACCACGACACCGTCAACGCCATCAGAGGGTGCTTCTGAGGCGATGATCTCTGAAGCGGTAACGGGGGTTGAACAGCCTCAAGTTTCTACTCCTGAAGTATCGGAGCCTCAAGTAGCGCCATCAACCCCGGTTGTTGAGCCACCTAAAGTGGTTAATCCGCCTGTAGAGCCACCAACTACTCCGCCACCGGCGGTATCAGAAACAACCGCGCCGAAAGGTGAGGCTTGGGTTGTGCAGTTAGGTGCCTTGAAAAATGCGGCGAAAGTTGAAGAAATTATTGCAAAAATGCACCTCTCCGGTTATCCAGTATATACCGTGCCTGCTCGCCCTGTTTCAGGAAAAGTGACACGTATCTATATTGGGCCTAATGCCTCAAAAGCAGAGTTACAGGCGATGTTACCTCGCCTTAAAGAGCTAACAGGCCTGCAAGGTGAAGTAAGAGCCTATAAACCATAACTATGTTGATGAGACATCAGATGAGTGAAGTAACAAGGTGTTAACTTATT