Homologs in group_451

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00590 FBDBKF_00590 64.0 Morganella morganii S1 fliF flagellar basal-body MS-ring/collar protein FliF
EHELCC_00955 EHELCC_00955 64.0 Morganella morganii S2 fliF flagellar basal-body MS-ring/collar protein FliF
NLDBIP_02505 NLDBIP_02505 64.0 Morganella morganii S4 fliF flagellar basal-body MS-ring/collar protein FliF
LHKJJB_04020 LHKJJB_04020 64.0 Morganella morganii S3 fliF flagellar basal-body MS-ring/collar protein FliF
HKOGLL_03025 HKOGLL_03025 64.0 Morganella morganii S5 fliF flagellar basal-body MS-ring/collar protein FliF
F4V73_RS06600 F4V73_RS06600 64.2 Morganella psychrotolerans fliF flagellar basal-body MS-ring/collar protein FliF

Distribution of the homologs in the orthogroup group_451

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_451

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15928 0.0 634 58 7 563 1 fliF Flagellar M-ring protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P25798 0.0 630 58 6 561 1 fliF Flagellar M-ring protein Escherichia coli (strain K12)
P57175 4.09e-125 381 36 11 572 3 fliF Flagellar M-ring protein Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8KA45 9.98e-121 370 37 12 575 3 fliF Flagellar M-ring protein Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89B00 4.24e-107 335 36 11 552 3 fliF Flagellar M-ring protein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q51463 4.62e-95 305 34 13 578 3 fliF Flagellar M-ring protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O67241 1.02e-59 209 29 11 559 1 fliF Flagellar M-ring protein Aquifex aeolicus (strain VF5)
Q53151 5.83e-59 209 31 14 585 3 fliF Flagellar M-ring protein Cereibacter sphaeroides
Q04954 2.42e-46 174 29 9 420 3 fliF Flagellar M-ring protein Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q8YDM4 5.32e-45 171 27 16 588 1 fliF Flagellar M-ring protein Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FUS3 7.53e-45 170 27 17 593 3 fliF Flagellar M-ring protein FliF Brucella suis biovar 1 (strain 1330)
O54239 1.4e-44 169 27 9 500 3 fliF Flagellar M-ring protein Rhizobium meliloti (strain 1021)
O52069 4e-44 168 27 16 588 3 fliF Flagellar M-ring protein Brucella abortus biovar 1 (strain 9-941)
P23447 5.62e-35 142 28 6 344 3 fliF Flagellar M-ring protein Bacillus subtilis (strain 168)
O83414 1.68e-18 92 22 11 453 3 fliF Flagellar M-ring protein Treponema pallidum (strain Nichols)
Q44912 3.02e-15 82 23 12 413 3 fliF Flagellar M-ring protein Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07960
Feature type CDS
Gene fliF
Product flagellar basal-body MS-ring/collar protein FliF
Location 1743252 - 1744973 (strand: 1)
Length 1722 (nucleotides) / 573 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_451
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01514 Secretory protein of YscJ/FliF family
PF08345 Flagellar M-ring protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1766 Cell motility (N)
Intracellular trafficking, secretion, and vesicular transport (U)		 NU Flagellar biosynthesis/type III secretory pathway M-ring protein FliF/YscJ

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02409 flagellar M-ring protein FliF Flagellar assembly -

Protein Sequence

MNAEKTDVVNQKKGFNAIINRIKADPKIPLIIAGSAAIAIFVAAFLWLQSPDYKVLYSNLSDKDGGEIVTQLTQMNVPYRLSQNGSAIMVPDNQVHELRLKLAQAGLPKGGAAGFELLDKEKFGISQFSEQINYQRALEGELARTIETLGPVQNARVHLALPKPSLFVREQKSPSASVTVGLLQGRALDEGQINAIVHIVASSVAGMPDSNVTIVDQSGKLLTQPDALGRDLNSIQLKYVQELESRYQQRIETLLGPIVGRGNVHAQVTAQVDFSHTEETAEEYKPNQPPNQAAVRSKQVSQSEQNGGMLAGGVPGALSNQPVAPPQAPIEKAKDTTADEKTTSTNANRSMTRNPNSNSRLDETTNYEVDRRIRHVKRPVGNIERLSVAVIVNYKTVEDKKKATEGEEPIVENKQVPLTDEQLQQIESLVREAMGYSQERGDSLSVVNSQFNDTEEPVISVPVWENPQILAKALDLGRWLLLVIIAWILWRKLVKPQLEKRREAEVAAQKAILKTKLEVTDDVNEAELDEESRRKQARQRVSAELQSQRIREMAEKDPRVVAMVIRQWMSKEQ

Flanking regions ( +/- flanking 50bp)

TTACGCCACGCTTTTAGTATTCATCCCGAACTACAAGGCAAGGATTGTCTATGAATGCCGAAAAAACCGACGTTGTGAACCAGAAAAAAGGTTTTAACGCCATTATTAACCGGATAAAAGCCGATCCGAAAATTCCGCTTATTATTGCGGGATCGGCGGCGATTGCCATTTTTGTTGCTGCTTTTTTATGGCTACAAAGCCCTGATTATAAAGTGCTTTATAGTAATCTTAGCGATAAAGATGGTGGCGAAATTGTCACACAGTTAACACAAATGAATGTACCCTATCGCCTATCACAAAATGGTTCTGCGATTATGGTACCTGACAATCAGGTTCATGAATTACGCCTGAAACTCGCACAAGCGGGGCTTCCAAAAGGTGGAGCTGCCGGTTTTGAACTACTTGATAAAGAAAAGTTTGGGATCAGCCAGTTCAGTGAACAGATTAACTATCAACGTGCACTTGAAGGGGAGCTTGCTCGTACCATCGAAACCTTAGGTCCAGTGCAAAATGCTCGTGTTCATTTAGCATTACCTAAACCCTCTCTTTTTGTTCGTGAGCAAAAATCACCTTCTGCTTCTGTAACAGTAGGTCTGCTGCAAGGTAGAGCCTTGGACGAAGGTCAAATTAATGCCATCGTACATATTGTAGCAAGTAGTGTTGCAGGTATGCCCGATAGTAATGTGACCATTGTTGATCAAAGCGGTAAGTTATTAACACAGCCCGATGCTTTAGGTCGTGATCTTAATTCTATTCAACTCAAATATGTCCAAGAGTTGGAAAGTCGCTACCAGCAACGTATTGAAACACTATTAGGCCCTATTGTTGGGCGTGGTAATGTTCATGCGCAGGTCACCGCTCAAGTTGATTTTTCTCATACAGAAGAAACCGCTGAAGAGTACAAGCCTAATCAGCCCCCTAACCAAGCTGCAGTACGCTCAAAACAAGTGAGCCAAAGTGAGCAAAATGGAGGCATGTTAGCTGGCGGTGTGCCCGGTGCGTTATCTAATCAACCTGTTGCACCACCGCAAGCGCCGATTGAAAAAGCCAAAGACACGACGGCTGATGAGAAAACAACATCTACCAATGCTAATCGTTCAATGACACGTAATCCAAACAGCAATAGCCGTTTAGATGAAACAACCAACTATGAAGTAGATCGTCGTATTCGTCATGTTAAACGACCTGTTGGCAATATTGAGCGCCTTTCTGTTGCGGTAATCGTCAATTACAAAACCGTAGAAGACAAGAAAAAAGCAACAGAAGGTGAAGAGCCTATTGTCGAAAATAAACAAGTTCCGTTAACCGATGAACAGCTTCAACAAATTGAAAGTTTAGTACGTGAAGCGATGGGTTATTCCCAAGAGCGTGGTGACTCTTTAAGTGTGGTTAATTCTCAATTTAACGATACCGAAGAGCCAGTGATTAGCGTTCCTGTGTGGGAAAATCCACAAATATTGGCTAAAGCATTAGATTTAGGCCGCTGGTTATTGCTTGTTATCATCGCGTGGATCTTATGGCGTAAATTAGTGAAACCTCAACTTGAAAAACGCCGTGAAGCAGAAGTCGCCGCACAAAAAGCGATTTTGAAAACCAAGCTTGAAGTGACAGATGATGTCAACGAAGCCGAATTAGATGAAGAATCAAGACGTAAACAAGCACGTCAACGTGTTAGTGCCGAATTACAAAGCCAACGTATTCGAGAGATGGCAGAAAAAGATCCTCGTGTTGTAGCCATGGTAATTCGTCAATGGATGAGTAAAGAACAATGAGTAATGACTTAACTGGAACCGAAAAAAGCGCCGTTATGTTACTGACATTG