Homologs in group_445

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00530 FBDBKF_00530 49.0 Morganella morganii S1 fliD flagellar filament capping protein FliD
EHELCC_01015 EHELCC_01015 49.0 Morganella morganii S2 fliD flagellar filament capping protein FliD
NLDBIP_02445 NLDBIP_02445 49.0 Morganella morganii S4 fliD flagellar filament capping protein FliD
LHKJJB_03960 LHKJJB_03960 49.0 Morganella morganii S3 fliD flagellar filament capping protein FliD
HKOGLL_03085 HKOGLL_03085 49.0 Morganella morganii S5 fliD flagellar filament capping protein FliD
F4V73_RS06545 F4V73_RS06545 49.2 Morganella psychrotolerans fliD flagellar filament capping protein FliD

Distribution of the homologs in the orthogroup group_445

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_445

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56827 2.54e-171 493 54 7 492 3 fliD Flagellar hook-associated protein 2 Xenorhabdus nematophila
P42274 3.04e-142 409 99 0 205 3 fliD Flagellar hook-associated protein 2 (Fragment) Proteus mirabilis
P16328 5.65e-112 341 42 6 472 1 fliD Flagellar hook-associated protein 2 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P58297 6.34e-89 282 37 7 481 3 fliD Flagellar hook-associated protein 2 Escherichia coli O157:H7
P24216 1.56e-84 271 37 6 481 1 fliD Flagellar hook-associated protein 2 Escherichia coli (strain K12)
Q9K3C5 6.43e-40 152 30 17 482 1 fliD B-type flagellar hook-associated protein 2 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O33421 1.08e-33 135 30 14 469 3 fliD A-type flagellar hook-associated protein 2 Pseudomonas aeruginosa
Q03475 4.21e-17 87 24 17 445 3 fliDL Lateral flagellar hook-associated protein 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9ZL91 2.06e-15 82 25 6 258 3 fliD Flagellar hook-associated protein 2 Helicobacter pylori (strain J99 / ATCC 700824)
P96786 2.29e-15 82 26 16 374 1 fliD Flagellar hook-associated protein 2 Helicobacter pylori (strain ATCC 700392 / 26695)
P39738 5.02e-15 80 22 19 510 1 fliD Flagellar hook-associated protein 2 Bacillus subtilis (strain 168)
Q9KQ63 1.33e-12 73 27 8 239 3 fliD Flagellar hook-associated protein 2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9R9R6 4.16e-12 71 23 18 486 3 fliD Flagellar hook-associated protein 2 Aeromonas caviae
Q9PHW6 2.06e-11 69 23 16 438 3 fliD Flagellar hook-associated protein 2 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q56705 2.71e-10 66 28 8 216 3 fliDP Polar flagellar hook-associated protein 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q56705 0.000704 45 27 10 176 3 fliDP Polar flagellar hook-associated protein 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
O83842 7.56e-10 65 24 7 275 3 fliD Flagellar hook-associated protein 2 Treponema pallidum (strain Nichols)
O51173 1.05e-08 61 27 10 254 3 fliD Flagellar hook-associated protein 2 Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q9X0K7 1.4e-08 60 24 17 403 3 fliD Flagellar hook-associated protein 2 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07920
Feature type CDS
Gene fliD
Product flagellar filament capping protein FliD
Location 1736497 - 1737915 (strand: 1)
Length 1419 (nucleotides) / 472 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_445
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02465 Flagellar hook-associated protein 2 N-terminus
PF07195 Flagellar hook-associated protein 2 C-terminus
PF07196 Flagellin hook IN motif

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1345 Cell motility (N) N Flagellar capping protein FliD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02407 flagellar hook-associated protein 2 Flagellar assembly -

Protein Sequence

MAGISALGIGAKMPLGETLMQLEAAENKRLEPLDKQMKSYDAQITAYGKIRSQLDKLQKASEELKKFDKIVATKVDDEFDAFKVTTDGKASIGNYTVSVTELAHAQTLKSKAVSDIKDPIGETLGEGKTRTLVITQKGEKEPLKIELTDSQTSIIELRDAINKKEGNVSATIVKAQDGVNHLVLTSRKEGTDSQMEITVEGDSKLNDFISYSTKTNSGAMTEIVKANNAKLTINGIEIERQTNEIKDAPEGITLNLKKKTNDNKDGVDKPEIITVARDIEPMKKAIKAWTDAYNELNKTYKDFTKYTQVEKGEDASKDNGVLLGDTTSRMIMSELKSFITRSQSSSEIDTLNKMGIKFKVDGTLEVDDKKLDKALKEKPANVKEFFMGDGKETGFGTQTYNYLKKTLQSNDGTLDIATDGVKKRKKSLDNQIKNTKRTIEATMERYKKQFQLLDKMVNAMTNSSASIERLLR

Flanking regions ( +/- flanking 50bp)

CCGATAACGCTGTGTAGGGATTATTTTACGAACACAGAAAGGAGACCAGTATGGCTGGTATTAGTGCACTAGGAATAGGCGCCAAGATGCCACTTGGCGAGACATTAATGCAATTAGAGGCTGCGGAAAATAAGCGCCTTGAACCTTTAGACAAACAGATGAAAAGCTACGATGCACAAATTACTGCATATGGAAAAATTCGTAGCCAATTAGATAAATTACAGAAAGCATCTGAAGAATTAAAAAAATTCGATAAAATCGTCGCCACCAAAGTTGATGATGAGTTTGATGCTTTTAAAGTAACCACTGATGGTAAAGCAAGCATTGGTAATTATACGGTCTCGGTAACAGAGCTTGCCCATGCTCAAACACTGAAATCAAAAGCCGTCAGTGATATCAAAGATCCTATTGGTGAAACATTAGGTGAAGGCAAAACACGGACTTTAGTGATCACCCAAAAAGGTGAAAAAGAGCCTTTAAAAATAGAGTTAACAGATAGTCAAACTTCTATTATTGAATTACGTGATGCTATCAATAAAAAAGAAGGCAACGTTTCTGCCACTATTGTAAAAGCCCAAGATGGCGTTAACCATTTAGTTCTGACTTCTCGTAAAGAAGGTACAGATTCTCAAATGGAAATCACTGTTGAAGGTGATAGTAAGCTTAACGATTTTATTAGCTACTCCACTAAAACAAACAGTGGTGCAATGACAGAGATCGTTAAGGCAAATAATGCAAAGTTAACGATTAATGGGATTGAAATTGAACGTCAAACTAATGAAATTAAAGATGCGCCTGAAGGGATCACGTTAAATCTTAAGAAAAAAACCAATGATAATAAAGATGGCGTAGATAAGCCTGAAATTATTACGGTTGCGCGTGATATTGAGCCAATGAAAAAGGCCATAAAAGCCTGGACCGATGCTTATAATGAATTAAATAAAACCTATAAAGATTTCACCAAGTACACCCAAGTTGAAAAAGGTGAAGATGCCTCTAAAGACAATGGTGTGTTATTAGGTGATACCACTAGCCGGATGATTATGTCTGAGCTAAAAAGCTTTATCACTCGTTCTCAATCTTCATCTGAGATTGATACCCTTAATAAAATGGGCATTAAATTTAAAGTAGATGGCACATTAGAAGTTGATGATAAAAAACTCGATAAAGCATTAAAAGAAAAACCTGCTAACGTCAAAGAGTTTTTTATGGGTGATGGTAAAGAAACAGGATTTGGTACTCAAACCTATAATTACCTGAAAAAAACGCTGCAATCCAACGACGGCACCCTTGATATTGCCACTGATGGTGTTAAAAAACGTAAAAAATCGTTAGATAACCAAATTAAAAATACCAAACGTACTATTGAAGCGACGATGGAACGTTATAAAAAACAGTTTCAATTATTAGATAAAATGGTTAATGCCATGACTAACTCAAGTGCATCAATTGAACGTTTATTACGCTAATTTTTAAGTAGGATATTAGGATATTATGTATCAACAATCAGCCAGTAAAA