Homologs in group_445

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00530 FBDBKF_00530 73.3 Morganella morganii S1 fliD flagellar filament capping protein FliD
EHELCC_01015 EHELCC_01015 73.3 Morganella morganii S2 fliD flagellar filament capping protein FliD
NLDBIP_02445 NLDBIP_02445 73.3 Morganella morganii S4 fliD flagellar filament capping protein FliD
LHKJJB_03960 LHKJJB_03960 73.3 Morganella morganii S3 fliD flagellar filament capping protein FliD
HKOGLL_03085 HKOGLL_03085 73.3 Morganella morganii S5 fliD flagellar filament capping protein FliD
PMI_RS07920 PMI_RS07920 49.2 Proteus mirabilis HI4320 fliD flagellar filament capping protein FliD

Distribution of the homologs in the orthogroup group_445

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_445

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q56827 1.14e-132 395 45 7 509 3 fliD Flagellar hook-associated protein 2 Xenorhabdus nematophila
P16328 1.45e-86 276 38 9 489 1 fliD Flagellar hook-associated protein 2 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P58297 2.96e-69 231 34 8 485 3 fliD Flagellar hook-associated protein 2 Escherichia coli O157:H7
P24216 9.38e-67 225 34 7 485 1 fliD Flagellar hook-associated protein 2 Escherichia coli (strain K12)
P42274 1.33e-53 182 50 2 208 3 fliD Flagellar hook-associated protein 2 (Fragment) Proteus mirabilis
Q9K3C5 3.23e-40 154 30 16 483 1 fliD B-type flagellar hook-associated protein 2 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O33421 1.97e-31 129 29 18 509 3 fliD A-type flagellar hook-associated protein 2 Pseudomonas aeruginosa
Q03475 1.6e-18 91 23 17 476 3 fliDL Lateral flagellar hook-associated protein 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9R9R6 4.98e-18 90 25 16 499 3 fliD Flagellar hook-associated protein 2 Aeromonas caviae
Q9KQ63 2.96e-13 75 25 8 256 3 fliD Flagellar hook-associated protein 2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9KQ63 1.26e-05 51 26 10 212 3 fliD Flagellar hook-associated protein 2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q56705 6.95e-12 71 27 5 205 3 fliDP Polar flagellar hook-associated protein 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q56705 2.14e-05 50 25 9 206 3 fliDP Polar flagellar hook-associated protein 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
O83842 9.06e-12 71 24 8 288 3 fliD Flagellar hook-associated protein 2 Treponema pallidum (strain Nichols)
Q9ZL91 2.69e-08 60 26 5 228 3 fliD Flagellar hook-associated protein 2 Helicobacter pylori (strain J99 / ATCC 700824)
Q9X0K7 2.38e-07 57 24 14 367 3 fliD Flagellar hook-associated protein 2 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q9PHW6 2.61e-07 57 25 21 444 3 fliD Flagellar hook-associated protein 2 Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P39738 2.76e-07 56 23 18 529 1 fliD Flagellar hook-associated protein 2 Bacillus subtilis (strain 168)
P96786 3.01e-07 56 26 5 228 1 fliD Flagellar hook-associated protein 2 Helicobacter pylori (strain ATCC 700392 / 26695)
Q9K6W0 5.36e-07 55 21 20 559 3 fliD Flagellar hook-associated protein 2 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
O51173 2.58e-05 50 26 6 189 3 fliD Flagellar hook-associated protein 2 Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q9KWW7 2.66e-05 50 25 10 268 3 fliD Flagellar hook-associated protein 2 Treponema maltophilum

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06545
Feature type CDS
Gene fliD
Product flagellar filament capping protein FliD
Location 1367457 - 1368923 (strand: 1)
Length 1467 (nucleotides) / 488 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_445
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02465 Flagellar hook-associated protein 2 N-terminus
PF07195 Flagellar hook-associated protein 2 C-terminus
PF07196 Flagellin hook IN motif

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1345 Cell motility (N) N Flagellar capping protein FliD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02407 flagellar hook-associated protein 2 Flagellar assembly -

Protein Sequence

MAGIASLGVGAGMDLNKQLDMLEAAEMRRLEPLAAQKTACDAQISAFGKLQSSLEKLKSAAEALKKYDDISTTKVSGEYKSFDVSTDGKAVPGVYDVRVDKLAKAQTIATKGQADNKADLGDTSADTRTIKITQGDGTDPKKVFEVTLDKEHTSLIEIADAINKKDKGVSASVVKDSNNEYHLVLTSKTEGIDSRISVNVTGDTKLANVLDCTSGVKEEPVDPAKPTGPKIKVTEVSGGNMEQKVAANNARLNINGFDIETSTNVVKDEFPGLKLTLKKESENGKEDHLIISTDIEPAKNKIKAWVDAYNEYQKLSTELTKYTQTESGKAADKSNGPLIGDSTLRGIQNTMRGQIRTPNGSGEVDTMNKLGIKQKLDGTLEIDTKKLDKALGENSSSVKEFFAGDGEKTGFATENFNYLKKTLDSREGTIHNATDGLEKKKKGIDKRIEQTTKQIENSMDLYRRQFQNLDKMMNTLSGTTQALGKMLG

Flanking regions ( +/- flanking 50bp)

CCGCAACCAACCGATAACTATGTAAAACCACTTTAATTCAGGAGAAGCACATGGCAGGCATAGCATCGTTAGGAGTTGGCGCGGGAATGGATCTCAATAAGCAGCTGGACATGTTAGAAGCCGCAGAAATGCGCCGTCTGGAGCCATTAGCCGCTCAGAAAACAGCGTGTGATGCTCAGATCAGTGCATTCGGTAAGTTACAGTCTTCACTGGAAAAATTAAAATCAGCGGCGGAAGCCCTGAAAAAATACGACGATATCAGTACCACCAAAGTCAGTGGTGAATACAAAAGCTTTGATGTCTCAACCGACGGTAAAGCCGTTCCGGGTGTATATGATGTGCGGGTGGATAAATTAGCCAAAGCACAGACTATTGCAACCAAAGGTCAGGCAGATAATAAAGCAGACCTCGGGGACACCTCCGCAGATACACGTACAATTAAAATTACCCAGGGTGATGGTACTGATCCGAAGAAAGTCTTTGAAGTGACACTGGATAAAGAACATACCTCATTAATTGAAATTGCCGATGCTATCAATAAAAAGGATAAAGGGGTTTCTGCCTCTGTTGTTAAAGACAGTAACAATGAATATCATCTGGTTTTAACCTCAAAAACCGAAGGGATAGATTCCCGTATCAGTGTAAATGTCACTGGTGATACTAAACTTGCTAATGTGCTGGACTGCACTTCAGGGGTTAAAGAAGAGCCAGTAGACCCTGCCAAGCCGACCGGACCCAAAATTAAGGTAACCGAGGTGTCCGGCGGTAATATGGAGCAAAAAGTCGCCGCTAATAATGCGCGGCTGAATATCAATGGTTTTGATATTGAAACCAGCACCAATGTCGTAAAAGATGAGTTTCCGGGTCTGAAACTGACTCTGAAAAAAGAGAGTGAAAACGGTAAAGAAGACCACCTGATTATTTCTACGGATATTGAACCGGCAAAGAACAAGATCAAAGCATGGGTGGATGCCTATAACGAGTATCAGAAACTCAGCACTGAGCTGACGAAATATACTCAGACCGAAAGTGGAAAGGCAGCTGATAAAAGTAATGGTCCGCTGATTGGCGACTCTACTTTGCGTGGTATTCAAAATACGATGCGCGGCCAGATCCGTACTCCGAACGGCAGTGGTGAAGTAGACACCATGAATAAACTCGGTATTAAGCAGAAGCTTGACGGAACACTGGAAATTGATACTAAAAAATTAGACAAGGCACTTGGCGAAAATTCGTCCAGCGTAAAAGAATTTTTCGCCGGTGACGGAGAGAAAACCGGTTTTGCGACTGAAAACTTTAATTACCTGAAAAAGACATTAGACAGTCGTGAAGGCACTATTCATAACGCGACTGATGGTCTGGAGAAAAAGAAAAAAGGCATCGATAAACGTATCGAGCAAACCACCAAACAGATTGAAAACTCGATGGATTTATACCGCCGTCAGTTTCAGAATCTGGATAAAATGATGAATACCCTTAGTGGTACCACCCAGGCACTCGGCAAAATGTTAGGTTAAAAATATGTATCAACGCAAGGCAAATCAGGCTTACCAACAAGTTAATCTTG