Homologs in group_212

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13730 FBDBKF_13730 47.2 Morganella morganii S1 - MFS transporter
EHELCC_11400 EHELCC_11400 47.2 Morganella morganii S2 - MFS transporter
NLDBIP_11745 NLDBIP_11745 47.2 Morganella morganii S4 - MFS transporter
LHKJJB_11605 LHKJJB_11605 47.2 Morganella morganii S3 - MFS transporter
HKOGLL_10215 HKOGLL_10215 47.2 Morganella morganii S5 - MFS transporter
F4V73_RS12600 F4V73_RS12600 46.4 Morganella psychrotolerans - nucleoside permease
PMI_RS04170 PMI_RS04170 24.5 Proteus mirabilis HI4320 - MFS transporter
PMI_RS14680 PMI_RS14680 28.1 Proteus mirabilis HI4320 - MFS transporter

Distribution of the homologs in the orthogroup group_212

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_212

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45562 2.84e-126 374 49 1 393 1 xapB Xanthosine permease Escherichia coli (strain K12)
P0AFF5 2.88e-112 338 44 1 395 3 nupG Nucleoside permease NupG Shigella flexneri
P0AFF4 2.88e-112 338 44 1 395 1 nupG Nucleoside permease NupG Escherichia coli (strain K12)
P76417 3.66e-43 159 28 8 375 1 yegT Putative nucleoside transporter YegT Escherichia coli (strain K12)
P02920 0.000144 47 24 9 275 1 lacY Lactose permease Escherichia coli (strain K12)
P77031 0.000274 46 24 5 186 1 yqcE Inner membrane protein YqcE Escherichia coli (strain K12)
P39589 0.000523 45 20 11 372 3 ywbF Uncharacterized transporter YwbF Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07650
Feature type CDS
Gene -
Product MFS transporter
Location 1668320 - 1669570 (strand: 1)
Length 1251 (nucleotides) / 416 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_212
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF03825 Nucleoside H+ symporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Protein Sequence

MNIVHRLKLVSFLQFFIWGSWLVTFASYLFDKLHFKGTDVGLIFSALGLASLIAPVIMGFIADKINNRKLVFITLHILSAFALVLMSQMTTVTTLFFATLLHLLFFMPSISMANSIIFELLEQKHLEPNDYFPKIRVYGTVGFIAAMWVISFLGFGNSYDQLFVAAIASIILAVFAMFLPATKATDKTEAKEEVAAFSLSNTLQVFKKKNVVIFLFFATLLGSVLQITNTFGVPFLQDMAKAPNADDSFLAHYPSVFLSISQISEVVFILFLPLLLKRVRIETIVLFSMIAWILRFGFFAYGDYSSLGQIVLLLSMIVYGCAFDFFNISGSLFLEKEIPLQYRSTAQGMFMTLVNGFGTYLGAMLSGWVIDLYTTDGVIDWQSFWLIFTGYTVAITALYLIYLVVPQKKTKVVEAH

Flanking regions ( +/- flanking 50bp)

CTAATCAATCATCAAAATACCAGATGATTGCCAGGCTAATAGGAAATTTAATGAACATCGTACATAGACTCAAACTTGTTTCATTCCTCCAATTTTTTATTTGGGGCTCTTGGCTTGTTACGTTTGCTTCATATCTATTTGATAAATTACATTTTAAAGGTACTGACGTTGGGCTAATTTTTAGTGCTTTAGGATTAGCATCACTGATCGCACCGGTGATCATGGGATTTATTGCGGACAAGATAAATAACCGTAAGCTGGTCTTTATTACCCTGCATATTTTATCCGCGTTTGCTTTAGTACTGATGTCTCAAATGACCACAGTGACTACCCTCTTCTTTGCGACACTTCTGCATTTATTGTTCTTTATGCCAAGCATTTCTATGGCAAACAGTATTATTTTTGAGTTACTAGAGCAAAAACACCTAGAGCCAAATGACTATTTCCCCAAAATCCGTGTTTATGGCACCGTGGGTTTTATTGCTGCAATGTGGGTTATTAGCTTCTTAGGTTTCGGTAATAGCTACGATCAACTGTTTGTTGCTGCAATAGCCTCTATTATCTTAGCGGTATTTGCGATGTTTTTACCGGCGACAAAAGCGACAGATAAAACAGAAGCAAAAGAAGAAGTGGCCGCTTTTAGCTTATCGAATACCTTACAAGTGTTTAAAAAGAAAAATGTGGTTATTTTCCTTTTCTTTGCCACATTGTTAGGTTCAGTATTGCAAATTACCAATACATTTGGGGTTCCATTCTTACAAGATATGGCCAAAGCACCTAATGCTGATGACTCTTTCTTGGCTCATTATCCTTCTGTTTTCTTATCCATTTCTCAAATTTCTGAAGTGGTCTTTATTCTATTTTTACCCCTGTTATTAAAACGAGTGAGAATAGAAACTATCGTATTATTTAGTATGATTGCATGGATCTTACGTTTTGGTTTCTTCGCTTACGGTGACTATTCATCATTAGGCCAAATCGTTCTGTTGTTATCCATGATTGTCTATGGTTGTGCTTTCGATTTCTTTAATATCTCCGGCTCGCTATTCCTAGAAAAAGAGATCCCATTACAATATCGCTCTACCGCACAAGGTATGTTTATGACCTTAGTGAATGGTTTTGGTACTTATTTAGGTGCGATGCTAAGTGGCTGGGTTATTGATTTGTATACCACAGATGGTGTTATTGATTGGCAGTCATTCTGGTTGATCTTTACGGGTTACACTGTGGCTATCACCGCACTTTATCTGATTTACTTAGTGGTTCCGCAGAAGAAAACAAAAGTTGTAGAAGCACATTAATTATTTCCCCCATTCTTTATTTGTTGCACTCACCGCTTATCTTTCGAGAT