Homologs in group_212

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13730 FBDBKF_13730 90.8 Morganella morganii S1 - MFS transporter
EHELCC_11400 EHELCC_11400 90.8 Morganella morganii S2 - MFS transporter
NLDBIP_11745 NLDBIP_11745 90.8 Morganella morganii S4 - MFS transporter
LHKJJB_11605 LHKJJB_11605 90.8 Morganella morganii S3 - MFS transporter
HKOGLL_10215 HKOGLL_10215 90.8 Morganella morganii S5 - MFS transporter
PMI_RS04170 PMI_RS04170 17.9 Proteus mirabilis HI4320 - MFS transporter
PMI_RS07650 PMI_RS07650 46.4 Proteus mirabilis HI4320 - MFS transporter
PMI_RS14680 PMI_RS14680 32.4 Proteus mirabilis HI4320 - MFS transporter

Distribution of the homologs in the orthogroup group_212

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_212

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45562 0.0 570 71 0 410 1 xapB Xanthosine permease Escherichia coli (strain K12)
P0AFF5 3.68e-162 465 56 0 406 3 nupG Nucleoside permease NupG Shigella flexneri
P0AFF4 3.68e-162 465 56 0 406 1 nupG Nucleoside permease NupG Escherichia coli (strain K12)
P76417 6.17e-58 198 31 11 419 1 yegT Putative nucleoside transporter YegT Escherichia coli (strain K12)
Q45632 0.000237 46 22 12 386 3 malA Maltose permease Geobacillus stearothermophilus
P39589 0.000409 46 20 9 369 3 ywbF Uncharacterized transporter YwbF Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12600
Feature type CDS
Gene -
Product nucleoside permease
Location 116168 - 117412 (strand: -1)
Length 1245 (nucleotides) / 414 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_212
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF03825 Nucleoside H+ symporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11537 MFS transporter, NHS family, xanthosine permease - -

Protein Sequence

MDIRIRLKAMLFLQYFIWGAWLITLGAYMIKTLNFTGADVGWIYSTKGLAAIIMPGLVGIIADKFIPANRLYGLCHLICAGALFYAATVTDVHVLFWVMLINAMAFMPTIALSNSVSYASLQKYNLDSVSHFPAIRVFGTIGFIAAMWTVSLMKFELSNTQLYIAAGASLLLAVYSLTLPAIPVVKQTGNTTWAQRYGLDAFVLFKQPTMAVFFLFAMLLGAVLQITNTFGSPFLHDFARIPEYQDSLVVQYPSILLSVSQMAEVVFILAIPFFLKRYGIKKVMLISMVAWTLRFGLFAFGEPVSIGFFFLVLSMIVYGCAFDFFNVSGSIFIEQTVSSKIRASAQGLFMMMVNGVGAYAGAIISGMVVDMFTVDGVKDWQSIWLIFSSYTVVLAVIFQFTFHYDHRTAKPASV

Flanking regions ( +/- flanking 50bp)

ATCATGGGACGTTGGCGGCCTTTTCCCTCTTTATCTCAGCGGAGATACCCATGGATATCAGAATCAGACTGAAAGCGATGTTGTTCCTCCAGTATTTTATCTGGGGCGCCTGGCTTATCACCCTCGGCGCATACATGATAAAAACCCTGAATTTTACCGGCGCAGATGTGGGCTGGATTTACAGCACCAAAGGGCTGGCTGCGATTATCATGCCCGGTCTGGTGGGCATTATTGCGGATAAATTTATTCCGGCAAACCGGCTCTATGGTTTGTGTCATCTGATCTGCGCGGGCGCACTTTTTTATGCCGCAACCGTCACCGATGTACATGTATTGTTCTGGGTAATGCTGATTAATGCGATGGCATTTATGCCGACGATTGCGCTGTCAAATTCCGTCAGTTATGCAAGCCTGCAAAAATATAATCTGGATTCAGTGTCGCATTTCCCTGCTATCCGCGTGTTCGGAACCATCGGTTTTATCGCAGCGATGTGGACAGTCAGTCTGATGAAGTTTGAACTGAGTAATACTCAGCTGTATATCGCGGCGGGGGCATCTCTGCTGCTGGCGGTTTACTCTCTGACTCTGCCGGCGATTCCGGTGGTGAAACAGACGGGTAATACGACCTGGGCACAGCGTTACGGGCTGGATGCCTTTGTGCTGTTTAAACAGCCGACAATGGCTGTTTTCTTTCTGTTTGCCATGTTGCTGGGTGCGGTACTGCAAATCACCAATACGTTCGGCAGTCCGTTTCTGCATGATTTTGCGCGTATTCCGGAATATCAGGATTCGCTGGTGGTACAGTATCCGTCCATTCTGCTTTCTGTCTCTCAGATGGCGGAAGTCGTGTTTATCCTTGCCATTCCGTTCTTTCTCAAGCGCTACGGTATTAAAAAAGTCATGCTGATCAGTATGGTGGCATGGACACTGCGTTTCGGACTGTTTGCCTTTGGTGAACCGGTATCAATCGGTTTCTTCTTCCTCGTGCTGTCCATGATTGTGTATGGCTGCGCATTTGATTTCTTCAACGTGTCCGGTTCGATTTTTATTGAACAGACCGTCAGCTCAAAAATCCGCGCCAGTGCGCAGGGGCTGTTTATGATGATGGTCAACGGCGTGGGGGCTTATGCGGGGGCGATTATCAGCGGTATGGTTGTCGATATGTTTACAGTTGATGGTGTGAAAGACTGGCAGTCAATCTGGCTGATTTTCTCTTCCTATACTGTTGTGCTGGCGGTTATTTTCCAGTTTACGTTCCATTATGATCACCGGACTGCAAAGCCTGCCTCTGTTTGAAGCGAATTAACGGTAACATAAAAACCAGCCGCGCCGGGAATGGCGCGGCT