Homologs in group_1832

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13565 FBDBKF_13565 57.7 Morganella morganii S1 ypfJ putative metalloprotease
EHELCC_08530 EHELCC_08530 57.7 Morganella morganii S2 ypfJ putative metalloprotease
NLDBIP_08855 NLDBIP_08855 57.7 Morganella morganii S4 ypfJ putative metalloprotease
LHKJJB_05410 LHKJJB_05410 57.7 Morganella morganii S3 ypfJ putative metalloprotease
HKOGLL_05505 HKOGLL_05505 57.7 Morganella morganii S5 ypfJ putative metalloprotease
F4V73_RS03200 F4V73_RS03200 57.7 Morganella psychrotolerans - neutral zinc metallopeptidase

Distribution of the homologs in the orthogroup group_1832

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1832

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64429 3.8e-104 308 52 4 295 4 ypfJ Uncharacterized protein YpfJ Escherichia coli (strain K12)
P64430 3.8e-104 308 52 4 295 4 ypfJ Uncharacterized protein YpfJ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P64431 3.8e-104 308 52 4 295 4 ypfJ Uncharacterized protein YpfJ Escherichia coli O157:H7
P65020 9.3e-40 143 36 4 212 4 BQ2027_MB2605 Uncharacterized protein Mb2605 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WL85 9.3e-40 143 36 4 212 1 Rv2575 Uncharacterized protein Rv2575 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WL84 9.3e-40 143 36 4 212 4 MT2651 Uncharacterized protein MT2651 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07605
Feature type CDS
Gene -
Product neutral zinc metallopeptidase
Location 1658996 - 1659880 (strand: -1)
Length 885 (nucleotides) / 294 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1832
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04228 Putative neutral zinc metallopeptidase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2321 General function prediction only (R) R Predicted metalloprotease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07054 uncharacterized protein - -

Protein Sequence

MRWNDRRRSNNVEDRRGQPSSASGGGNLPLGLIALLLRTKYGFVIIIILVIASFMGFDFNSLTGQTSQPTQNSQQQSALYNEAADFSSVVLASTEDFWQGMFAKAGEQYRDPKLVLYTNSTTTQCGTGTKMMGPFYCPADQKIYLDLSFYNEMKNSLGGGGEFAQGYVISHEVGHHVQHLLGITTQMREKQQMARSKVEANRLSVRLELQADCFAGMWGRFIAGEGRVDEADLLTAIKTAQAIGDDRLQRQQQGYAVPDSFTHGTAEQRKTWFMRGYNSGDIKSCDTFASSSLN

Flanking regions ( +/- flanking 50bp)

AAAATGACCTAGCAATTAAAATTAAGTGAATTACATAATGGGGAAGGGTTATGCGTTGGAATGATCGCCGAAGAAGCAATAATGTTGAAGATAGAAGAGGGCAGCCTTCTTCTGCATCCGGTGGTGGTAATCTCCCATTAGGATTAATTGCACTATTATTACGTACAAAATATGGCTTTGTGATCATTATTATTTTGGTGATCGCAAGCTTTATGGGGTTTGATTTTAATTCGCTTACAGGGCAAACATCACAACCAACACAAAATAGCCAACAACAATCCGCCCTTTATAATGAAGCGGCAGATTTTAGCAGTGTTGTATTAGCCAGTACGGAAGATTTTTGGCAAGGGATGTTTGCCAAAGCCGGCGAGCAATATCGTGATCCTAAATTAGTGCTATATACCAACAGTACCACAACGCAATGCGGTACCGGCACTAAAATGATGGGGCCTTTTTATTGTCCTGCAGACCAAAAAATTTATCTCGATCTCTCTTTTTATAATGAAATGAAAAACAGCCTTGGTGGGGGTGGAGAGTTTGCTCAAGGTTATGTGATTTCTCATGAAGTGGGACATCATGTTCAGCATCTACTTGGTATCACCACACAAATGCGTGAAAAACAGCAAATGGCACGTTCAAAAGTGGAAGCAAATCGCTTATCAGTAAGACTAGAACTGCAAGCTGATTGTTTTGCGGGTATGTGGGGGCGCTTTATTGCCGGTGAAGGCCGTGTTGATGAAGCGGACTTACTGACGGCCATTAAAACCGCACAAGCTATCGGTGATGATAGGCTGCAACGCCAACAACAGGGTTACGCTGTACCGGATAGCTTTACTCACGGCACTGCAGAACAACGTAAGACATGGTTTATGCGCGGCTACAATAGTGGCGATATTAAATCTTGTGATACATTTGCTTCTTCGTCATTGAACTAATAACATCTCACGCTTAAATGATATTAGAATGATTCAGAGAAAGAGAAGGA