Homologs in group_1870

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13565 FBDBKF_13565 89.5 Morganella morganii S1 ypfJ putative metalloprotease
EHELCC_08530 EHELCC_08530 89.5 Morganella morganii S2 ypfJ putative metalloprotease
NLDBIP_08855 NLDBIP_08855 89.5 Morganella morganii S4 ypfJ putative metalloprotease
LHKJJB_05410 LHKJJB_05410 89.5 Morganella morganii S3 ypfJ putative metalloprotease
HKOGLL_05505 HKOGLL_05505 89.5 Morganella morganii S5 ypfJ putative metalloprotease
PMI_RS07605 PMI_RS07605 57.7 Proteus mirabilis HI4320 - neutral zinc metallopeptidase

Distribution of the homologs in the orthogroup group_1870

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1870

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64429 3.88e-137 392 63 2 291 4 ypfJ Uncharacterized protein YpfJ Escherichia coli (strain K12)
P64430 3.88e-137 392 63 2 291 4 ypfJ Uncharacterized protein YpfJ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P64431 3.88e-137 392 63 2 291 4 ypfJ Uncharacterized protein YpfJ Escherichia coli O157:H7
P65020 1.14e-45 159 42 5 206 4 BQ2027_MB2605 Uncharacterized protein Mb2605 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WL85 1.14e-45 159 42 5 206 1 Rv2575 Uncharacterized protein Rv2575 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WL84 1.14e-45 159 42 5 206 4 MT2651 Uncharacterized protein MT2651 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03200
Feature type CDS
Gene -
Product neutral zinc metallopeptidase
Location 682672 - 683559 (strand: 1)
Length 888 (nucleotides) / 295 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1870
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04228 Putative neutral zinc metallopeptidase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2321 General function prediction only (R) R Predicted metalloprotease

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07054 uncharacterized protein - -

Protein Sequence

MRWQGRRQSDNIEDRRGSGSRMPGGSSGGPRIPLPRGKAGLVVIVIVVVAGFYGLDLTGFISGDPMPGGQTSAQQRPVQNGAQEQKQAEFTGVMLAETEAVWARKFSQMNRQYREPKLVLYRGATPTGCGAGQSVMGPFYCPADQKVYIDLSFYDDMRTKLAAGGDFAQGYVVAHEVGHHVQHLLGIDSQVRERQQRSSQKEANRLSVKMELQADCFAGIWGHEMKNAGILEQGDLQNALDAAQAIGDDRLQKQSQGRVIPDSFTHGTSAQRHEWFKRGFDTGDIAQCDTFSALK

Flanking regions ( +/- flanking 50bp)

ACCTGCGGTTTGAATGAATAAGGGTATATCTATCAGAACAGAGAGCTATCATGCGTTGGCAAGGGCGTCGTCAGAGCGACAATATAGAAGATCGCCGGGGTTCCGGCAGCAGAATGCCGGGTGGATCGTCCGGCGGACCGCGTATTCCGTTACCGCGTGGTAAAGCCGGTCTGGTGGTGATAGTGATCGTTGTCGTTGCCGGGTTTTACGGCCTTGACCTGACGGGCTTTATTTCCGGTGACCCGATGCCCGGCGGGCAAACTTCTGCGCAACAGCGTCCTGTGCAAAACGGTGCACAGGAGCAGAAACAGGCTGAATTCACCGGGGTGATGCTGGCAGAAACAGAAGCGGTCTGGGCACGGAAATTTTCACAGATGAACCGTCAGTACCGCGAGCCGAAATTGGTACTGTACCGTGGAGCCACGCCTACGGGATGTGGCGCGGGGCAGTCAGTTATGGGACCATTTTATTGTCCGGCTGACCAGAAAGTGTATATCGATCTCTCTTTTTATGATGATATGCGCACCAAACTGGCGGCAGGCGGGGATTTTGCTCAGGGCTATGTGGTTGCCCATGAAGTGGGGCACCATGTTCAGCATCTGCTGGGCATTGACAGCCAGGTGCGTGAGCGCCAACAGCGCAGCAGTCAGAAGGAAGCAAACCGGTTATCCGTTAAAATGGAATTACAGGCGGACTGCTTTGCCGGTATCTGGGGGCATGAAATGAAAAATGCCGGGATACTCGAACAGGGTGATTTACAGAACGCACTGGATGCGGCGCAGGCTATCGGTGATGACCGCCTGCAAAAACAGAGTCAGGGACGGGTTATCCCCGACAGCTTTACACACGGTACATCCGCACAGCGCCATGAATGGTTTAAACGCGGTTTTGACACCGGTGATATCGCGCAATGTGATACATTTTCCGCACTGAAATAATAATATCTGCCCGGTTTATTCCTGTACCGGCCGGGCAGGTTTGATTATCC