Homologs in group_1828

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13535 FBDBKF_13535 67.7 Morganella morganii S1 ybaN DUF454 domain-containing protein
EHELCC_08560 EHELCC_08560 67.7 Morganella morganii S2 ybaN DUF454 domain-containing protein
NLDBIP_08885 NLDBIP_08885 67.7 Morganella morganii S4 ybaN DUF454 domain-containing protein
LHKJJB_05380 LHKJJB_05380 67.7 Morganella morganii S3 ybaN DUF454 domain-containing protein
HKOGLL_05535 HKOGLL_05535 67.7 Morganella morganii S5 ybaN DUF454 domain-containing protein
F4V73_RS03225 F4V73_RS03225 66.9 Morganella psychrotolerans - DUF454 family protein

Distribution of the homologs in the orthogroup group_1828

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1828

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAR7 7e-62 188 74 0 122 3 ybaN Inner membrane protein YbaN Shigella flexneri
P0AAR5 7e-62 188 74 0 122 1 ybaN Inner membrane protein YbaN Escherichia coli (strain K12)
P0AAR6 7e-62 188 74 0 122 3 ybaN Inner membrane protein YbaN Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07585
Feature type CDS
Gene -
Product DUF454 family protein
Location 1655816 - 1656190 (strand: -1)
Length 375 (nucleotides) / 124 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1828
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04304 Protein of unknown function (DUF454)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2832 Function unknown (S) S Uncharacterized membrane protein YbaN, DUF454 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09790 uncharacterized protein - -

Protein Sequence

MKRILLIIAGWLSVGLATLGVVLPVLPTTPFLLLAAWCFSRSSTRFHHWLLYRSWFGGYLRYWQTYRAMPKGAKPKAILVILVTFAISLWLVSMWWVRILLLIILACLLIFMWRLPVIDKQDVS

Flanking regions ( +/- flanking 50bp)

TTATTTACTCTTTACCTTAGAGCGACCAAGCATAATTTGGAAAGCATAACATGAAACGGATATTATTGATTATAGCAGGGTGGTTATCTGTTGGATTAGCCACATTAGGTGTTGTTTTACCCGTGTTACCCACTACACCATTTTTGTTATTAGCTGCATGGTGTTTTTCTCGCTCATCAACACGCTTTCATCACTGGTTGCTATATCGCTCTTGGTTTGGTGGTTATTTGCGTTATTGGCAAACTTATCGCGCCATGCCTAAGGGGGCTAAGCCGAAAGCTATTTTAGTCATTTTAGTGACTTTTGCTATCTCGCTATGGTTGGTCTCAATGTGGTGGGTGAGAATTTTATTGCTGATAATTTTAGCCTGTCTGTTGATATTTATGTGGAGACTTCCTGTAATAGATAAACAAGATGTCTCCTAAGATAAATAAAATCTAATTATTCTGGTAGCACAATATAGCGTTGATAAACC