Homologs in group_2888

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11690 FBDBKF_11690 41.1 Morganella morganii S1 sra stationary-phase-induced ribosome-associated protein
EHELCC_17610 EHELCC_17610 41.1 Morganella morganii S2 sra stationary-phase-induced ribosome-associated protein
NLDBIP_19280 NLDBIP_19280 41.1 Morganella morganii S4 sra stationary-phase-induced ribosome-associated protein
LHKJJB_18050 LHKJJB_18050 41.1 Morganella morganii S3 sra stationary-phase-induced ribosome-associated protein
HKOGLL_19030 HKOGLL_19030 41.1 Morganella morganii S5 sra stationary-phase-induced ribosome-associated protein

Distribution of the homologs in the orthogroup group_2888

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2888

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07505
Feature type CDS
Gene sra
Product stationary-phase-induced ribosome-associated protein
Location 1635618 - 1635851 (strand: 1)
Length 234 (nucleotides) / 77 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2888
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF08136 Ribosome hibernation factor SRA

Protein Sequence

MKTNRVARRILGLPYNLSRSKKKVRFSIITPTESDNLPAELKNATRICLKQDFRKNAQNKRIYMKLTDAYPDYLLVS

Flanking regions ( +/- flanking 50bp)

GTTATAATTAACAAGCTTTCTCTATATTACATGTAAAAAAGGAGTGAGTTGTGAAAACAAACAGAGTCGCAAGACGTATTTTAGGTTTACCTTATAATTTAAGTCGGTCTAAAAAGAAAGTGCGTTTTTCCATTATTACGCCTACAGAAAGTGATAATCTTCCCGCAGAGTTAAAAAATGCAACTCGGATCTGTTTAAAACAAGATTTCAGAAAAAATGCGCAAAATAAGCGTATTTATATGAAATTAACCGATGCTTATCCAGATTATCTTCTAGTAAGTTAATTACTTATGCCTAATGTTAGATTATAAATAACTTTTATTTTATTATTTAT