Homologs in group_2888

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11690 FBDBKF_11690 100.0 Morganella morganii S1 sra stationary-phase-induced ribosome-associated protein
EHELCC_17610 EHELCC_17610 100.0 Morganella morganii S2 sra stationary-phase-induced ribosome-associated protein
LHKJJB_18050 LHKJJB_18050 100.0 Morganella morganii S3 sra stationary-phase-induced ribosome-associated protein
HKOGLL_19030 HKOGLL_19030 100.0 Morganella morganii S5 sra stationary-phase-induced ribosome-associated protein
PMI_RS07505 PMI_RS07505 41.1 Proteus mirabilis HI4320 sra stationary-phase-induced ribosome-associated protein

Distribution of the homologs in the orthogroup group_2888

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2888

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19280
Feature type CDS
Gene sra
Product stationary-phase-induced ribosome-associated protein
Location 2149 - 2376 (strand: 1)
Length 228 (nucleotides) / 75 (amino acids)

Contig

Accession ZDB_547
Length 17998 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2888
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MRTNRAARRLLGMPYTYSKGKSKINIFIAAASDENAEKIPQALKSKSRICVIQDDNKKTRTYHKIETHYPGYMAC

Flanking regions ( +/- flanking 50bp)

TCAGTAAGTTGCTATAATAGGTGAACGTTCACAACAATGAGGAGTTTATTATGCGAACTAACAGAGCTGCGAGACGTTTGTTAGGAATGCCCTATACATACAGTAAAGGGAAATCAAAAATTAACATCTTTATTGCAGCTGCCTCAGATGAAAACGCGGAAAAAATCCCGCAGGCGCTGAAGTCAAAAAGCAGAATCTGTGTCATTCAGGACGACAATAAGAAGACCCGAACTTATCACAAAATCGAGACACATTATCCGGGCTATATGGCATGCTGATACCACTGCACATGTGATAACGGCATGATGCAATAAGAAAAGGGGCTGAG