Homologs in group_4469

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4469

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4469

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07425
Feature type CDS
Gene -
Product DMT family transporter
Location 1620452 - 1621417 (strand: -1)
Length 966 (nucleotides) / 321 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4469
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF04657 Putative inner membrane exporter, YdcZ

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3238 Function unknown (S) S Uncharacterized membrane protein YdcZ, DUF606 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09936 bacterial/archaeal transporter family-2 protein Quorum sensing -

Protein Sequence

MSTKNLSTPLLMVATVLAGMLSPMQSAVNGQLGHVLKDGNASAVISFASGLVVMFFIIMSKKQYRQQFASIPTLIKTRKIPLWNWFAGLCGAMVVFSEGASASALGIATFQTALISALLLSGLLCDRFGIGVDEKKYFTPYRVLGAVLAVVATLFVVSPQWHSTSFIYLAILPFLAGLLAGWQPAGNSKVAEATGSMMVSITWNFIVGFTVLTIALVVRMALGHITLELPATWWMYLGGPLGLMSIALMAILVRGLGLLMLGVASTAGQLLGSVLIDLLLPSLGNTVYLVTIIGTLFALVGAIVTTIPEFKATKSVKRAGA

Flanking regions ( +/- flanking 50bp)

AAAAATAAAAAAGAAATCACTCATAGTCAATAATCCAAAAGGAACATCTTATGAGTACAAAAAATTTATCAACACCCTTGCTGATGGTAGCAACTGTGTTAGCAGGGATGCTATCACCAATGCAGTCTGCGGTGAATGGGCAACTGGGACATGTATTAAAAGACGGTAATGCTAGTGCAGTTATCTCTTTTGCCAGTGGTTTAGTGGTCATGTTTTTTATCATTATGTCCAAAAAACAATATCGTCAGCAATTTGCTTCTATTCCGACATTAATTAAAACACGTAAAATTCCATTATGGAACTGGTTTGCTGGCCTCTGTGGCGCAATGGTGGTTTTTTCTGAAGGAGCATCAGCCAGTGCATTAGGAATAGCTACATTCCAAACAGCATTAATTTCAGCACTGTTATTATCAGGTTTATTATGTGACCGCTTTGGTATAGGTGTGGATGAGAAGAAATACTTCACCCCATATCGTGTATTAGGTGCCGTATTAGCTGTTGTTGCTACTCTTTTTGTCGTTTCTCCGCAGTGGCATTCAACCTCTTTTATTTACTTAGCTATTCTACCTTTTTTAGCGGGTTTATTAGCGGGATGGCAACCAGCAGGTAATTCAAAAGTGGCTGAAGCAACAGGTTCGATGATGGTTTCTATTACTTGGAACTTTATTGTTGGATTTACTGTTTTAACGATTGCGTTAGTAGTACGTATGGCGTTAGGGCATATAACACTGGAGCTTCCTGCTACATGGTGGATGTATTTAGGTGGGCCTTTAGGGTTAATGTCTATTGCATTAATGGCTATTTTAGTACGAGGCTTAGGGTTACTAATGTTAGGTGTTGCATCAACTGCGGGCCAATTACTGGGTTCAGTATTAATTGACCTATTATTACCTTCGTTGGGAAATACTGTTTATTTAGTCACAATCATCGGTACGTTATTTGCCTTAGTCGGCGCCATTGTTACTACCATTCCTGAGTTTAAAGCGACTAAATCAGTAAAAAGAGCAGGGGCATAATCATGAAAGGTTATATTCAAACGGTAACGGGTCCGGTTAAAAAAGCGGAT