Homologs in group_965

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05315 FBDBKF_05315 78.8 Morganella morganii S1 dppC ABC-type dipeptide/oligopeptide/nickel transport system, permease component
EHELCC_12275 EHELCC_12275 78.8 Morganella morganii S2 dppC ABC-type dipeptide/oligopeptide/nickel transport system, permease component
NLDBIP_12615 NLDBIP_12615 78.8 Morganella morganii S4 dppC ABC-type dipeptide/oligopeptide/nickel transport system, permease component
LHKJJB_12475 LHKJJB_12475 78.8 Morganella morganii S3 dppC ABC-type dipeptide/oligopeptide/nickel transport system, permease component
HKOGLL_11090 HKOGLL_11090 78.8 Morganella morganii S5 dppC ABC-type dipeptide/oligopeptide/nickel transport system, permease component
F4V73_RS05770 F4V73_RS05770 77.7 Morganella psychrotolerans - ABC transporter permease

Distribution of the homologs in the orthogroup group_965

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_965

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77463 2.09e-69 219 46 2 261 1 ddpC Probable D,D-dipeptide transport system permease protein DdpC Escherichia coli (strain K12)
P51000 1.94e-64 206 42 1 263 3 dppC Dipeptide transport system permease protein DppC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P94312 2.44e-63 204 40 2 267 3 dppC Dipeptide transport system permease protein DppC Alkalihalophilus pseudofirmus (strain ATCC BAA-2126 / JCM 17055 / OF4)
A0A0H2ZFV0 8.68e-62 200 44 3 275 1 dppC Di/tripeptide transport system permease protein DppC Pseudomonas aeruginosa (strain UCBPP-PA14)
Q6D3B2 1.43e-60 197 42 1 269 3 gsiD Glutathione transport system permease protein GsiD Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
P42063 8.55e-60 195 36 3 278 3 appC Oligopeptide transport system permease protein AppC Bacillus subtilis (strain 168)
Q83S25 4.89e-58 190 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Shigella flexneri
P0C2L2 4.89e-58 190 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Shigella flexneri serotype 5b (strain 8401)
Q3Z3V1 1.55e-57 189 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Shigella sonnei (strain Ss046)
Q323W2 1.55e-57 189 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Shigella boydii serotype 4 (strain Sb227)
Q8X6V6 1.55e-57 189 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O157:H7
Q8FJK8 1.58e-57 189 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TJL6 1.58e-57 189 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P75799 1.71e-57 189 39 1 269 1 gsiD Glutathione transport system permease protein GsiD Escherichia coli (strain K12)
Q32IB8 3.75e-57 188 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Shigella dysenteriae serotype 1 (strain Sd197)
Q1RE93 5.65e-57 187 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli (strain UTI89 / UPEC)
A1A971 5.65e-57 187 39 1 269 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O1:K1 / APEC
P0AEG1 5.72e-57 187 44 2 275 1 dppC Dipeptide transport system permease protein DppC Escherichia coli (strain K12)
P0AEG2 5.72e-57 187 44 2 275 3 dppC Dipeptide transport system permease protein DppC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEG3 5.72e-57 187 44 2 275 3 dppC Dipeptide transport system permease protein DppC Escherichia coli O157:H7
Q7CQV4 7.24e-57 187 40 1 258 3 gsiD Glutathione transport system permease protein GsiD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XF88 7.24e-57 187 40 1 258 3 gsiD Glutathione transport system permease protein GsiD Salmonella typhi
Q5PGP6 7.24e-57 187 40 1 258 3 gsiD Glutathione transport system permease protein GsiD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57RA9 7.24e-57 187 40 1 258 3 gsiD Glutathione transport system permease protein GsiD Salmonella choleraesuis (strain SC-B67)
A0A0H3JU73 2.36e-52 175 34 0 263 1 cntC Metal-staphylopine import system permease protein CntC Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q2FVE9 2.38e-52 175 34 0 263 1 cntC Metal-staphylopine import system permease protein CntC Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q8YDG8 1.45e-51 173 41 1 264 3 BMEII0207/BMEII0208 Putative peptide transport system permease protein BMEII0207/BMEII0208 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YJK0 1.45e-51 173 41 1 264 3 BAB2_1051 Putative peptide transport system permease protein BAB2_1051 Brucella abortus (strain 2308)
Q8VQK5 1.45e-51 173 41 1 264 3 BruAb2_1032 Putative peptide transport system permease protein BruAb2_1032 Brucella abortus biovar 1 (strain 9-941)
Q8FUW9 3.24e-51 172 41 1 239 3 BRA1093 Putative peptide transport system permease protein BRA1093/BS1330_II1085 Brucella suis biovar 1 (strain 1330)
P0AFA9 9.66e-51 171 42 0 240 1 nikC Nickel transport system permease protein NikC Escherichia coli (strain K12)
P0AFB0 9.66e-51 171 42 0 240 3 nikC Nickel transport system permease protein NikC Escherichia coli O157:H7
P26904 1.39e-49 169 34 1 265 2 dppC Dipeptide transport system permease protein DppC Bacillus subtilis (strain 168)
P24139 1.73e-46 160 35 0 257 1 oppC Oligopeptide transport system permease protein OppC Bacillus subtilis (strain 168)
Q7A0Y0 4.31e-45 156 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain MW2)
Q6G9H9 4.31e-45 156 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain MSSA476)
Q5HG39 4.31e-45 156 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain COL)
Q2FYQ6 4.31e-45 156 36 1 225 1 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FH56 4.31e-45 156 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain USA300)
Q2YXY8 7.61e-45 155 35 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q7A5Q7 8.2e-45 155 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain N315)
Q99UA1 8.2e-45 155 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q6GH26 1.27e-44 155 36 1 225 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain MRSA252)
P0A2J5 6.66e-42 148 35 1 267 2 sapC Peptide transport system permease protein SapC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2J6 6.66e-42 148 35 1 267 3 sapC Peptide transport system permease protein SapC Salmonella typhi
P0AGH7 1.13e-41 148 35 1 267 3 sapC Peptide transport system permease protein SapC Shigella flexneri
P0AGH5 1.13e-41 148 35 1 267 1 sapC Putrescine export system permease protein SapC Escherichia coli (strain K12)
P0AGH6 1.13e-41 148 35 1 267 3 sapC Peptide transport system permease protein SapC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8FWN9 8.56e-41 145 33 2 272 3 BRA0407 Putative peptide permease protein BRA0407/BS1330_II0404 Brucella suis biovar 1 (strain 1330)
Q53192 3.13e-40 144 37 3 239 3 NGR_a01420 Probable peptide ABC transporter permease protein y4tQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8YBN8 6.52e-40 143 33 2 272 3 BMEII0861 Putative peptide permease protein BMEII0861 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YK65 6.52e-40 143 33 2 272 3 BAB2_0815 Putative peptide permease protein BAB2_0815 Brucella abortus (strain 2308)
Q577J7 6.52e-40 143 33 2 272 3 BruAb2_0794 Putative peptide permease protein BruAb2_0794 Brucella abortus biovar 1 (strain 9-941)
A5VU89 6.52e-40 143 33 2 272 3 BOV_A0350 Putative peptide permease protein BOV_A0350 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
P66965 3.43e-37 136 34 2 250 3 BQ2027_MB1313C Putative peptide transport permease protein Mb1313c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WFZ9 3.43e-37 136 34 2 250 1 Rv1282c Putative peptide transport permease protein Rv1282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WFZ8 3.43e-37 136 34 2 250 3 MT1319 Putative peptide transport permease protein MT1319 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P45287 8.8e-37 135 32 1 275 3 sapC Peptide transport system permease protein SapC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45053 4.09e-36 134 33 5 246 3 oppC Oligopeptide transport system permease protein OppC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P08006 1.5e-33 127 33 6 259 1 oppC Oligopeptide transport system permease protein OppC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AFH6 6.67e-31 120 30 3 269 1 oppC Oligopeptide transport system permease protein OppC Escherichia coli (strain K12)
P0AFH7 6.67e-31 120 30 3 269 3 oppC Oligopeptide transport system permease protein OppC Escherichia coli O157:H7
P0A4P0 2.33e-25 105 29 4 260 3 oppC Oligopeptide transport system permease protein OppC Lactococcus lactis subsp. cremoris (strain SK11)
P0A4N9 4.51e-25 104 29 4 260 1 oppC Oligopeptide transport system permease protein OppC Lactococcus lactis subsp. lactis (strain IL1403)
A2RI76 2.83e-24 103 30 0 215 1 dppC Dipeptide transport system permease protein DppC Lactococcus lactis subsp. cremoris (strain MG1363)
Q7D203 3.7e-24 103 33 4 218 3 yejE Peptidoglycan transport system permease protein YejE Agrobacterium fabrum (strain C58 / ATCC 33970)
P0A4N0 4.54e-24 102 24 2 270 3 amiD Oligopeptide transport system permease protein AmiD Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4M9 4.54e-24 102 24 2 270 3 amiD Oligopeptide transport system permease protein AmiD Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P33915 3.6e-20 91 28 2 225 1 yejE Inner membrane ABC transporter permease protein YejE Escherichia coli (strain K12)
P47324 2.57e-06 51 26 3 171 3 oppC Oligopeptide transport system permease protein OppC Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75553 3.59e-06 51 28 5 183 3 oppC Oligopeptide transport system permease protein OppC Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07175
Feature type CDS
Gene -
Product ABC transporter permease
Location 1570129 - 1570959 (strand: 1)
Length 831 (nucleotides) / 276 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_965
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00528 Binding-protein-dependent transport system inner membrane component
PF12911 N-terminal TM domain of oligopeptide transport permease C

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1173 Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 EP ABC-type dipeptide/oligopeptide/nickel transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02034 peptide/nickel transport system permease protein Quorum sensing -

Protein Sequence

MSLSFLTKIARSPSAFIGLSLLLLLLLIAIFAPWLAPYDPNWQHAAQRLLAPNAAHWLGTDSYGRDILSRLIYGTRPMLGLVGLVALITLPLGLFIGILSGYYGGWTERILMRFTDIIMSMPSLILAFAFVAMLGPGLLNGALALALTAWPAYARQARSEIQHLRNSDYLAAAEMMGINGIRLLWGHILPLCLPSAIVRLALNLAVIILAAAGLGFLGLGARPPMAEWGAMIAEGMPVIFDQWWVAAIPGTAILISSLAFNLLGDGLRDVLGESHE

Flanking regions ( +/- flanking 50bp)

AATAATATGACAGATATCGTTATTCGTTTGACTGATCCGAGGTTACGCTAATGTCACTCTCCTTTTTAACAAAAATAGCGCGTTCACCTTCAGCGTTTATCGGTCTGTCATTGTTGCTTCTTCTGCTACTAATTGCCATTTTTGCCCCTTGGCTAGCGCCTTATGATCCAAATTGGCAACACGCTGCACAACGCTTATTAGCCCCCAATGCTGCACACTGGTTAGGTACTGATAGTTATGGTCGCGATATTCTTTCACGCTTAATTTATGGTACACGCCCAATGTTAGGTTTGGTGGGTCTTGTTGCCTTGATAACACTACCATTAGGGCTATTTATTGGCATTTTATCCGGTTATTACGGCGGTTGGACAGAGCGGATTTTAATGCGTTTTACCGACATCATTATGTCTATGCCCTCCTTAATTTTAGCCTTTGCCTTTGTCGCCATGTTAGGGCCGGGATTACTTAACGGTGCATTAGCCCTTGCACTTACAGCATGGCCGGCTTATGCCCGCCAAGCCCGTAGTGAAATTCAACACTTACGTAATAGTGATTACCTTGCAGCCGCTGAAATGATGGGAATTAACGGTATTAGACTATTATGGGGGCATATTCTTCCTTTATGTTTACCGTCTGCCATTGTACGTTTAGCCCTTAATTTAGCGGTGATCATTCTTGCTGCAGCAGGTTTAGGTTTCCTTGGGCTAGGTGCTCGCCCTCCCATGGCGGAATGGGGAGCAATGATTGCCGAAGGGATGCCCGTTATTTTTGATCAGTGGTGGGTGGCCGCTATTCCGGGTACGGCAATTTTAATCAGTAGCCTTGCTTTTAACTTATTGGGTGATGGATTACGCGATGTATTAGGAGAAAGCCATGAATAAAGCCCCTTTAATCGAAGTCGATAATCTGTGTATTGATTTTCCACGTGCTA