Homologs in group_1019

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05690 FBDBKF_05690 61.5 Morganella morganii S1 - Oxidoreductase
EHELCC_11900 EHELCC_11900 61.5 Morganella morganii S2 - Oxidoreductase
NLDBIP_12240 NLDBIP_12240 61.5 Morganella morganii S4 - Oxidoreductase
LHKJJB_12100 LHKJJB_12100 61.5 Morganella morganii S3 - Oxidoreductase
HKOGLL_10715 HKOGLL_10715 61.5 Morganella morganii S5 - Oxidoreductase
F4V73_RS03615 F4V73_RS03615 57.7 Morganella psychrotolerans - DUF1289 domain-containing protein

Distribution of the homologs in the orthogroup group_1019

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1019

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64475 3.07e-23 87 53 0 79 4 ydhL Uncharacterized protein YdhL Shigella flexneri
P64474 3.07e-23 87 53 0 79 4 ydhL Uncharacterized protein YdhL Escherichia coli (strain K12)
Q8CW10 1.13e-22 85 53 0 79 4 ydhL Uncharacterized protein YdhL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06720
Feature type CDS
Gene -
Product DUF1289 domain-containing protein
Location 1469294 - 1469533 (strand: -1)
Length 240 (nucleotides) / 79 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1019
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06945 Protein of unknown function (DUF1289)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3313 General function prediction only (R) R Predicted Fe-S protein YdhL, DUF1289 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06938 uncharacterized protein - -

Protein Sequence

MQEQLEFFDIPSPCIGRCESNLQGYCIGCYRSRQERFSWSTMSQQEKRNVLRLCRQRYLRAQQKTVSETEKENEQLDLF

Flanking regions ( +/- flanking 50bp)

ATCTCTTTTTACTATACTCTATAGTAACAAATAATTGGGGAGAATAATCAATGCAAGAACAATTAGAATTCTTCGATATCCCAAGCCCTTGCATTGGTCGATGTGAATCTAATTTACAAGGGTATTGCATTGGTTGTTACCGTAGTCGTCAAGAACGCTTTAGTTGGTCAACGATGAGTCAACAAGAAAAACGAAATGTATTGAGACTTTGTCGACAACGATATTTAAGAGCTCAACAAAAAACAGTGTCTGAAACAGAAAAAGAGAATGAACAGCTGGATTTATTTTAAATTTATTATTTATTTTTAAATTTTAAAATAAAACTAACGTTTTAATATAA