Homologs in group_999

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05585 FBDBKF_05585 62.9 Morganella morganii S1 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
EHELCC_12005 EHELCC_12005 62.9 Morganella morganii S2 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
NLDBIP_12345 NLDBIP_12345 62.9 Morganella morganii S4 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
LHKJJB_12205 LHKJJB_12205 62.9 Morganella morganii S3 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
HKOGLL_10820 HKOGLL_10820 62.9 Morganella morganii S5 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
F4V73_RS03720 F4V73_RS03720 63.8 Morganella psychrotolerans - TIGR01620 family protein

Distribution of the homologs in the orthogroup group_999

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_999

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4EWK1 0.0 708 100 0 348 3 PMI1371 UPF0283 membrane protein PMI1371 Proteus mirabilis (strain HI4320)
Q9F4G9 4.63e-175 493 70 2 350 3 ycjF UPF0283 protein YcjF Yersinia enterocolitica
A1JNH2 4.63e-175 493 70 2 350 3 YE2117 UPF0283 membrane protein YE2117 Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
A4TIU0 6.2e-172 484 68 2 350 3 YPDSF_0796 UPF0283 membrane protein YPDSF_0796 Yersinia pestis (strain Pestoides F)
A9QZ74 6.2e-172 484 68 2 350 3 YpAngola_A2532 UPF0283 membrane protein YpAngola_A2532 Yersinia pestis bv. Antiqua (strain Angola)
Q8ZE38 6.2e-172 484 68 2 350 3 YPO2347 UPF0283 membrane protein YPO2347/y1985/YP_2134 Yersinia pestis
Q66A67 6.2e-172 484 68 2 350 3 YPTB2265 UPF0283 membrane protein YPTB2265 Yersinia pseudotuberculosis serotype I (strain IP32953)
B1JJS9 6.2e-172 484 68 2 350 3 YPK_1899 UPF0283 membrane protein YPK_1899 Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q1CIP4 6.2e-172 484 68 2 350 3 YPN_1807 UPF0283 membrane protein YPN_1807 Yersinia pestis bv. Antiqua (strain Nepal516)
Q1C7B0 6.2e-172 484 68 2 350 3 YPA_1696 UPF0283 membrane protein YPA_1696 Yersinia pestis bv. Antiqua (strain Antiqua)
C6DJX5 6.34e-171 482 65 2 344 3 PC1_2326 UPF0283 membrane protein PC1_2326 Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B2K5F2 6.96e-171 482 68 2 350 3 YPTS_2342 UPF0283 membrane protein YPTS_2342 Yersinia pseudotuberculosis serotype IB (strain PB1/+)
A7FHN8 1.6e-170 481 68 2 350 3 YpsIP31758_1791 UPF0283 membrane protein YpsIP31758_1791 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q6D5Q4 1.62e-169 478 65 2 344 3 ECA1987 UPF0283 membrane protein ECA1987 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q7N3Y1 6.18e-168 474 65 2 350 3 plu2581 UPF0283 membrane protein plu2581 Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A8GF29 3.15e-163 462 68 2 345 3 Spro_2618 UPF0283 membrane protein Spro_2618 Serratia proteamaculans (strain 568)
Q3Z166 3.35e-162 460 63 3 349 3 ycjF UPF0283 membrane protein YcjF Shigella sonnei (strain Ss046)
B5Z0P2 1.03e-157 449 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X8K9 1.03e-157 449 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O157:H7
Q1RC43 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain UTI89 / UPEC)
P0A8R7 1.46e-157 448 64 3 349 1 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain K12)
B1IST8 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A8R8 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TI43 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AAT4 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O1:K1 / APEC
A7ZZR4 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O9:H4 (strain HS)
B1XCF0 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain K12 / DH10B)
C4ZV70 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain K12 / MC4100 / BW2952)
B7MUG2 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O81 (strain ED1a)
B7MLZ8 1.46e-157 448 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O45:K1 (strain S88 / ExPEC)
B1LGA6 7e-157 446 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain SMS-3-5 / SECEC)
B7NHM5 7e-157 446 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q83LB2 7.64e-157 446 64 3 349 3 ycjF UPF0283 membrane protein YcjF Shigella flexneri
Q0T579 7.64e-157 446 64 3 349 3 ycjF UPF0283 membrane protein YcjF Shigella flexneri serotype 5b (strain 8401)
B7URD0 1.66e-156 446 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B2U0L5 1.87e-156 445 64 3 349 3 ycjF UPF0283 membrane protein YcjF Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6IA37 1.87e-156 445 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain SE11)
B7N4C9 1.87e-156 445 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7LYI8 1.87e-156 445 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O8 (strain IAI1)
B7L587 1.87e-156 445 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain 55989 / EAEC)
A7ZLF1 1.87e-156 445 64 3 349 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O139:H28 (strain E24377A / ETEC)
Q320A9 7.19e-156 444 64 3 349 3 ycjF UPF0283 membrane protein YcjF Shigella boydii serotype 4 (strain Sb227)
Q9LA29 1.16e-155 443 64 3 345 3 ycjF UPF0283 membrane protein YcjF Shigella dysenteriae
Q32GL1 1.16e-155 443 64 3 345 3 ycjF UPF0283 membrane protein YcjF Shigella dysenteriae serotype 1 (strain Sd197)
Q8Z7A9 2.03e-153 437 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella typhi
B2VKR0 1.98e-152 435 62 3 350 3 ETA_16440 UPF0283 membrane protein ETA_16440 Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A4WAU8 1.21e-148 426 64 3 350 3 Ent638_2153 UPF0283 membrane protein Ent638_2153 Enterobacter sp. (strain 638)
B7LRX6 3.9e-148 424 64 3 345 3 ycjF UPF0283 membrane protein YcjF Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B5F588 4.7e-148 424 65 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella agona (strain SL483)
C0Q3S8 5.97e-148 424 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi C (strain RKS4594)
B4TWZ4 7.85e-148 424 65 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella schwarzengrund (strain CVM19633)
A9MWW8 9.05e-148 423 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q57NX8 1.48e-147 423 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella choleraesuis (strain SC-B67)
B5FUK9 1.99e-147 422 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella dublin (strain CT_02021853)
B5BJ45 2.01e-147 422 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi A (strain AKU_12601)
Q5PHP3 2.01e-147 422 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T6S8 3.75e-147 422 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella newport (strain SL254)
B5R4A8 1.42e-146 420 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella enteritidis PT4 (strain P125109)
Q8ZP64 3.42e-145 417 65 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TJG4 3.81e-145 417 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella heidelberg (strain SL476)
B5R9Z8 7.76e-145 416 64 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella gallinarum (strain 287/91 / NCTC 13346)
A8AGB5 3.55e-139 402 64 3 349 3 CKO_01392 UPF0283 membrane protein CKO_01392 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A9MQ55 2.95e-138 399 63 3 349 3 ycjF UPF0283 membrane protein YcjF Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5XRW2 1.51e-135 392 65 5 350 3 KPK_3110 UPF0283 membrane protein KPK_3110 Klebsiella pneumoniae (strain 342)
A6T814 1.72e-135 392 65 4 350 3 KPN78578_12740 UPF0283 membrane protein KPN78578_12740 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A5UFL3 4.92e-99 300 45 3 331 3 CGSHiGG_02710 UPF0283 membrane protein CGSHiGG_02710 Haemophilus influenzae (strain PittGG)
P43931 6.32e-98 296 44 3 331 3 HI_0043 UPF0283 membrane protein HI_0043 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B0UT28 4.6e-96 292 43 4 331 3 HSM_0945 UPF0283 membrane protein HSM_0945 Histophilus somni (strain 2336)
Q0I337 2.1e-95 290 43 4 331 3 HS_0596 UPF0283 membrane protein HS_0596 Histophilus somni (strain 129Pt)
Q9CMC3 2.82e-95 290 41 4 351 3 PM0909 UPF0283 membrane protein PM0909 Pasteurella multocida (strain Pm70)
A6VMX8 2.14e-88 273 43 6 334 3 Asuc_0957 UPF0283 membrane protein Asuc_0957 Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q6LPF8 3.86e-87 269 40 4 341 3 PBPRA2435 UPF0283 membrane protein PBPRA2435 Photobacterium profundum (strain SS9)
B8F381 4.39e-85 264 44 5 324 3 HAPS_0079 UPF0283 membrane protein HAPS_0079 Glaesserella parasuis serovar 5 (strain SH0165)
Q8DAD7 7.29e-77 242 40 4 310 3 VV1_2269 UPF0283 membrane protein VV1_2269 Vibrio vulnificus (strain CMCP6)
Q7MJT4 7.29e-77 242 40 4 310 3 VV2076 UPF0283 membrane protein VV2076 Vibrio vulnificus (strain YJ016)
P59917 9.41e-75 237 38 6 342 3 HD_1769 UPF0283 membrane protein HD_1769 Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q87NJ8 1.27e-74 237 37 4 341 3 VP1870 UPF0283 membrane protein VP1870 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7MYQ5 3.8e-71 228 36 4 341 3 VIBHAR_01918 UPF0283 membrane protein VIBHAR_01918 Vibrio campbellii (strain ATCC BAA-1116)
Q8EG03 5.91e-43 156 40 3 254 3 SO_1811 UPF0283 membrane protein SO_1811 Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q8UFP1 2.2e-25 108 30 4 269 3 Atu1356 UPF0283 membrane protein Atu1356 Agrobacterium fabrum (strain C58 / ATCC 33970)
B9JWY6 2.55e-24 105 30 4 252 3 Avi_2471 UPF0283 membrane protein Avi_2471 Allorhizobium ampelinum (strain ATCC BAA-846 / DSM 112012 / S4)
B5ZRH1 3.12e-23 102 26 7 325 3 Rleg2_1967 UPF0283 membrane protein Rleg2_1967 Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Q92PF5 3.44e-23 102 27 4 272 3 R01807 UPF0283 membrane protein R01807 Rhizobium meliloti (strain 1021)
Q1MFY9 9.18e-23 100 25 7 325 3 RL2646 UPF0283 membrane protein RL2646 Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
B3PPV4 4.5e-22 99 27 3 253 3 RHECIAT_CH0002430 UPF0283 membrane protein RHECIAT_CH0002430 Rhizobium etli (strain CIAT 652)
Q2K7S4 8.05e-22 98 26 4 296 3 RHE_CH02332 UPF0283 membrane protein RHE_CH02332 Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
Q6N9G6 8.37e-22 98 34 1 163 3 RPA1583 UPF0283 membrane protein RPA1583 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
A9MB47 1.2e-21 97 31 3 176 3 BCAN_A1047 UPF0283 membrane protein BCAN_A1047 Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666)
Q8G0Q5 1.2e-21 97 31 3 176 3 BR1033 UPF0283 membrane protein BR1033/BS1330_I1029 Brucella suis biovar 1 (strain 1330)
A6X0T1 1.39e-21 97 33 3 159 3 Oant_2119 UPF0283 membrane protein Oant_2119 Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
B9JFT7 3.68e-21 96 26 4 272 3 Arad_2632 UPF0283 membrane protein Arad_2632 Rhizobium rhizogenes (strain K84 / ATCC BAA-868)
A5VQH6 4.75e-21 95 31 3 176 3 BOV_0999 UPF0283 membrane protein BOV_0999 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
A6U9P2 5.59e-21 95 31 2 173 3 Smed_1530 UPF0283 membrane protein Smed_1530 Sinorhizobium medicae (strain WSM419)
C0RJ08 5.83e-21 95 30 3 176 3 BMEA_A1074 UPF0283 membrane protein BMEA_A1074 Brucella melitensis biotype 2 (strain ATCC 23457)
Q98M18 9.87e-21 95 29 5 267 3 mlr0776 UPF0283 membrane protein mlr0776 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
B2S5P5 1.06e-20 95 30 3 176 3 BAbS19_I09770 UPF0283 membrane protein BAbS19_I09770 Brucella abortus (strain S19)
Q8YH52 1.06e-20 95 30 3 176 3 BMEI0952 UPF0283 membrane protein BMEI0952 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q57D97 1.06e-20 95 30 3 176 3 BruAb1_1038 UPF0283 membrane protein BruAb1_1038 Brucella abortus biovar 1 (strain 9-941)
B0CGI5 3.53e-20 93 31 3 176 3 BSUIS_A1077 UPF0283 membrane protein BSUIS_A1077 Brucella suis (strain ATCC 23445 / NCTC 10510)
Q11IG3 7.31e-20 92 27 8 296 3 Meso_1416 UPF0283 membrane protein Meso_1416 Chelativorans sp. (strain BNC1)
Q89E33 1.44e-16 83 31 4 205 3 blr7254 UPF0283 membrane protein blr7254 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06620
Feature type CDS
Gene -
Product YcjF family protein
Location 1450376 - 1451422 (strand: -1)
Length 1047 (nucleotides) / 348 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_999
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF05128 Domain of unknown function (DUF697)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3768 Function unknown (S) S Uncharacterized membrane protein YcjF, UPF0283 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08990 putative membrane protein - -

Protein Sequence

MNEPLKSRIDFKQSTLQNEEISLKKGLDFNQDEQFVPYNPQLEAQENEGRLEGEIQSALKPRKSLWKRLITVASTILGVSVIAQAGQWIYQSWINSDWIALGAASAGGLIVIAGMGSVITEWRRIYRLRQRADERDKARELLYSHAIGNGRPFCEDLAKQAGINSQHPAYIRWQSTLHDTHNDREILELYSQLVQPILDKQARAEISRSAAESTLMIAVSPLAMVDMAFIGWRNIRLINRIAQIYGIELGYYSRLKLFRLVLVNIAFAGATELVREVGMDWLSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDNKPKLSDFRKELIGQLKNTLGNKKKE

Flanking regions ( +/- flanking 50bp)

CATATTCGTATGGATAGTGCCTTGGAGTTTTTATTAGGGGATAAACTAAAATGAATGAGCCATTAAAATCACGTATTGATTTTAAACAATCAACCTTACAAAACGAAGAAATTAGCTTAAAAAAAGGGCTTGATTTCAATCAAGATGAACAATTTGTTCCCTACAATCCGCAATTAGAGGCACAGGAAAATGAAGGGCGTTTAGAAGGTGAGATCCAATCGGCCCTAAAGCCTAGAAAAAGTTTATGGAAACGCTTAATAACAGTGGCGAGTACTATTTTAGGTGTTAGTGTTATTGCTCAAGCGGGACAGTGGATCTATCAATCATGGATAAATTCTGATTGGATTGCTTTAGGCGCAGCCAGTGCGGGAGGATTAATTGTTATTGCGGGTATGGGATCGGTAATTACTGAGTGGCGTCGTATTTATCGTTTACGCCAACGGGCTGACGAGCGTGATAAAGCGAGAGAATTACTCTATAGTCATGCAATAGGGAATGGTCGCCCTTTTTGTGAAGATTTAGCCAAACAAGCAGGTATTAATTCACAACATCCTGCTTATATTCGTTGGCAAAGTACATTACATGATACGCATAACGATAGAGAAATTTTAGAATTATATAGCCAATTAGTACAACCGATTTTAGATAAGCAAGCACGGGCTGAAATTAGTCGTTCTGCAGCGGAATCAACCCTTATGATTGCAGTAAGTCCATTAGCAATGGTGGATATGGCGTTTATTGGTTGGAGAAATATTCGGTTAATTAATCGTATTGCACAAATATATGGTATTGAACTTGGTTACTATAGCCGACTAAAGCTATTTCGCTTGGTACTCGTCAATATTGCGTTTGCTGGGGCGACTGAATTAGTGAGAGAAGTGGGAATGGATTGGCTTTCACAAGATTTGGCTGCTCGGTTATCCACGCGTGCTGCTCAAGGTATTGGCGCTGGATTATTAACTGCCCGATTGGGAATTAAAGCAATGGAGTTATGCCGTCCATTACCCTGGATTGATAATAAGCCTAAATTGAGTGACTTTAGAAAAGAGCTTATCGGTCAATTAAAAAATACATTAGGTAATAAGAAGAAAGAGTGAGTTACCTATCAATATATTCTTTAATTCAATATAAATTGAATAGCCTCAAC