Homologs in group_999

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05585 FBDBKF_05585 85.1 Morganella morganii S1 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
EHELCC_12005 EHELCC_12005 85.1 Morganella morganii S2 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
NLDBIP_12345 NLDBIP_12345 85.1 Morganella morganii S4 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
LHKJJB_12205 LHKJJB_12205 85.1 Morganella morganii S3 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
HKOGLL_10820 HKOGLL_10820 85.1 Morganella morganii S5 ycjF Uncharacterized membrane protein YcjF, UPF0283 family
PMI_RS06620 PMI_RS06620 63.8 Proteus mirabilis HI4320 - YcjF family protein

Distribution of the homologs in the orthogroup group_999

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_999

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9F4G9 7.74e-159 452 66 1 352 3 ycjF UPF0283 protein YcjF Yersinia enterocolitica
A1JNH2 7.74e-159 452 66 1 352 3 YE2117 UPF0283 membrane protein YE2117 Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q7N3Y1 9.02e-159 452 63 1 348 3 plu2581 UPF0283 membrane protein plu2581 Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A7FHN8 1.03e-158 451 66 1 348 3 YpsIP31758_1791 UPF0283 membrane protein YpsIP31758_1791 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
A4TIU0 1.29e-158 451 66 1 348 3 YPDSF_0796 UPF0283 membrane protein YPDSF_0796 Yersinia pestis (strain Pestoides F)
A9QZ74 1.29e-158 451 66 1 348 3 YpAngola_A2532 UPF0283 membrane protein YpAngola_A2532 Yersinia pestis bv. Antiqua (strain Angola)
Q8ZE38 1.29e-158 451 66 1 348 3 YPO2347 UPF0283 membrane protein YPO2347/y1985/YP_2134 Yersinia pestis
Q66A67 1.29e-158 451 66 1 348 3 YPTB2265 UPF0283 membrane protein YPTB2265 Yersinia pseudotuberculosis serotype I (strain IP32953)
B1JJS9 1.29e-158 451 66 1 348 3 YPK_1899 UPF0283 membrane protein YPK_1899 Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q1CIP4 1.29e-158 451 66 1 348 3 YPN_1807 UPF0283 membrane protein YPN_1807 Yersinia pestis bv. Antiqua (strain Nepal516)
Q1C7B0 1.29e-158 451 66 1 348 3 YPA_1696 UPF0283 membrane protein YPA_1696 Yersinia pestis bv. Antiqua (strain Antiqua)
Q3Z166 2.02e-158 451 63 2 354 3 ycjF UPF0283 membrane protein YcjF Shigella sonnei (strain Ss046)
B4EWK1 2.09e-157 448 63 2 350 3 PMI1371 UPF0283 membrane protein PMI1371 Proteus mirabilis (strain HI4320)
B2K5F2 2.27e-157 448 66 1 348 3 YPTS_2342 UPF0283 membrane protein YPTS_2342 Yersinia pseudotuberculosis serotype IB (strain PB1/+)
C6DJX5 5.41e-157 447 62 4 351 3 PC1_2326 UPF0283 membrane protein PC1_2326 Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q6D5Q4 5.64e-155 442 61 4 351 3 ECA1987 UPF0283 membrane protein ECA1987 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B5Z0P2 1.29e-153 439 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X8K9 1.29e-153 439 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O157:H7
Q1RC43 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain UTI89 / UPEC)
P0A8R7 1.57e-153 438 64 2 354 1 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain K12)
B1IST8 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A8R8 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TI43 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AAT4 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O1:K1 / APEC
A7ZZR4 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O9:H4 (strain HS)
B1XCF0 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain K12 / DH10B)
C4ZV70 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain K12 / MC4100 / BW2952)
B7MUG2 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O81 (strain ED1a)
B7MLZ8 1.57e-153 438 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O45:K1 (strain S88 / ExPEC)
Q83LB2 3e-153 437 64 2 354 3 ycjF UPF0283 membrane protein YcjF Shigella flexneri
Q0T579 3e-153 437 64 2 354 3 ycjF UPF0283 membrane protein YcjF Shigella flexneri serotype 5b (strain 8401)
B1LGA6 1.14e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain SMS-3-5 / SECEC)
B7NHM5 1.14e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B2U0L5 1.92e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B6IA37 1.92e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain SE11)
B7N4C9 1.92e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7LYI8 1.92e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O8 (strain IAI1)
B7L587 1.92e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli (strain 55989 / EAEC)
A7ZLF1 1.92e-152 436 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O139:H28 (strain E24377A / ETEC)
B7URD0 2.19e-152 435 64 2 354 3 ycjF UPF0283 membrane protein YcjF Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q320A9 1.32e-151 433 63 2 354 3 ycjF UPF0283 membrane protein YcjF Shigella boydii serotype 4 (strain Sb227)
Q8Z7A9 1.87e-151 433 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella typhi
A8GF29 1.17e-148 426 66 4 356 3 Spro_2618 UPF0283 membrane protein Spro_2618 Serratia proteamaculans (strain 568)
Q9LA29 8.12e-147 421 63 2 346 3 ycjF UPF0283 membrane protein YcjF Shigella dysenteriae
Q32GL1 8.12e-147 421 63 2 346 3 ycjF UPF0283 membrane protein YcjF Shigella dysenteriae serotype 1 (strain Sd197)
B5F588 5.14e-146 419 65 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella agona (strain SL483)
C0Q3S8 6.82e-146 419 65 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi C (strain RKS4594)
Q57NX8 9.79e-146 419 65 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella choleraesuis (strain SC-B67)
B2VKR0 1.17e-145 418 62 3 350 3 ETA_16440 UPF0283 membrane protein ETA_16440 Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A9MWW8 1.6e-145 418 65 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4TWZ4 1.65e-145 418 65 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella schwarzengrund (strain CVM19633)
B5FUK9 2.92e-145 417 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella dublin (strain CT_02021853)
B4T6S8 4.77e-145 417 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella newport (strain SL254)
B5BJ45 4.88e-145 417 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi A (strain AKU_12601)
Q5PHP3 4.88e-145 417 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5R4A8 1.04e-144 416 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella enteritidis PT4 (strain P125109)
B5R9Z8 5.47e-143 412 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q8ZP64 8.47e-143 411 65 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TJG4 1.02e-141 408 64 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella heidelberg (strain SL476)
B7LRX6 3.43e-141 407 64 2 351 3 ycjF UPF0283 membrane protein YcjF Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A8AGB5 8.63e-139 401 64 2 355 3 CKO_01392 UPF0283 membrane protein CKO_01392 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A4WAU8 4.36e-138 399 64 2 348 3 Ent638_2153 UPF0283 membrane protein Ent638_2153 Enterobacter sp. (strain 638)
A9MQ55 2.78e-137 397 63 3 355 3 ycjF UPF0283 membrane protein YcjF Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B5XRW2 1.64e-129 377 63 3 355 3 KPK_3110 UPF0283 membrane protein KPK_3110 Klebsiella pneumoniae (strain 342)
A6T814 7.45e-129 375 63 3 355 3 KPN78578_12740 UPF0283 membrane protein KPN78578_12740 Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
A5UFL3 6.75e-90 276 40 4 347 3 CGSHiGG_02710 UPF0283 membrane protein CGSHiGG_02710 Haemophilus influenzae (strain PittGG)
Q9CMC3 2.87e-89 275 44 1 301 3 PM0909 UPF0283 membrane protein PM0909 Pasteurella multocida (strain Pm70)
P43931 8.43e-89 274 40 4 347 3 HI_0043 UPF0283 membrane protein HI_0043 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B0UT28 7.36e-87 269 39 5 352 3 HSM_0945 UPF0283 membrane protein HSM_0945 Histophilus somni (strain 2336)
Q0I337 3.54e-86 267 39 5 352 3 HS_0596 UPF0283 membrane protein HS_0596 Histophilus somni (strain 129Pt)
B8F381 1.88e-85 265 42 4 324 3 HAPS_0079 UPF0283 membrane protein HAPS_0079 Glaesserella parasuis serovar 5 (strain SH0165)
A6VMX8 1.57e-84 263 38 4 351 3 Asuc_0957 UPF0283 membrane protein Asuc_0957 Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
Q6LPF8 2.95e-83 259 40 3 346 3 PBPRA2435 UPF0283 membrane protein PBPRA2435 Photobacterium profundum (strain SS9)
P59917 4.54e-77 243 39 8 339 3 HD_1769 UPF0283 membrane protein HD_1769 Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q8DAD7 3.95e-74 236 41 6 303 3 VV1_2269 UPF0283 membrane protein VV1_2269 Vibrio vulnificus (strain CMCP6)
Q7MJT4 3.95e-74 236 41 6 303 3 VV2076 UPF0283 membrane protein VV2076 Vibrio vulnificus (strain YJ016)
Q87NJ8 7.04e-72 230 37 5 345 3 VP1870 UPF0283 membrane protein VP1870 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7MYQ5 7.31e-69 222 40 4 290 3 VIBHAR_01918 UPF0283 membrane protein VIBHAR_01918 Vibrio campbellii (strain ATCC BAA-1116)
Q8EG03 1.84e-48 171 42 3 257 3 SO_1811 UPF0283 membrane protein SO_1811 Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q8UFP1 2.58e-25 108 27 6 335 3 Atu1356 UPF0283 membrane protein Atu1356 Agrobacterium fabrum (strain C58 / ATCC 33970)
B5ZRH1 2.88e-25 107 27 8 329 3 Rleg2_1967 UPF0283 membrane protein Rleg2_1967 Rhizobium leguminosarum bv. trifolii (strain WSM2304)
Q1MFY9 9.09e-25 106 26 8 329 3 RL2646 UPF0283 membrane protein RL2646 Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
B3PPV4 1.03e-24 106 26 7 328 3 RHECIAT_CH0002430 UPF0283 membrane protein RHECIAT_CH0002430 Rhizobium etli (strain CIAT 652)
Q2K7S4 1.42e-24 105 25 6 327 3 RHE_CH02332 UPF0283 membrane protein RHE_CH02332 Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
B9JWY6 3.13e-24 105 29 4 260 3 Avi_2471 UPF0283 membrane protein Avi_2471 Allorhizobium ampelinum (strain ATCC BAA-846 / DSM 112012 / S4)
Q92PF5 8.61e-24 103 28 5 285 3 R01807 UPF0283 membrane protein R01807 Rhizobium meliloti (strain 1021)
Q6N9G6 5.5e-21 96 32 1 176 3 RPA1583 UPF0283 membrane protein RPA1583 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
A9MB47 5.96e-21 95 31 3 175 3 BCAN_A1047 UPF0283 membrane protein BCAN_A1047 Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666)
Q8G0Q5 5.96e-21 95 31 3 175 3 BR1033 UPF0283 membrane protein BR1033/BS1330_I1029 Brucella suis biovar 1 (strain 1330)
A6U9P2 7.3e-21 95 36 0 138 3 Smed_1530 UPF0283 membrane protein Smed_1530 Sinorhizobium medicae (strain WSM419)
A6X0T1 1.18e-20 95 31 4 195 3 Oant_2119 UPF0283 membrane protein Oant_2119 Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
A5VQH6 1.3e-20 94 28 10 327 3 BOV_0999 UPF0283 membrane protein BOV_0999 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YH52 2.58e-20 94 31 3 175 3 BMEI0952 UPF0283 membrane protein BMEI0952 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
C0RJ08 2.98e-20 94 30 3 175 3 BMEA_A1074 UPF0283 membrane protein BMEA_A1074 Brucella melitensis biotype 2 (strain ATCC 23457)
B2S5P5 5.15e-20 93 30 3 175 3 BAbS19_I09770 UPF0283 membrane protein BAbS19_I09770 Brucella abortus (strain S19)
Q57D97 5.15e-20 93 30 3 175 3 BruAb1_1038 UPF0283 membrane protein BruAb1_1038 Brucella abortus biovar 1 (strain 9-941)
B9JFT7 5.59e-20 93 25 3 274 3 Arad_2632 UPF0283 membrane protein Arad_2632 Rhizobium rhizogenes (strain K84 / ATCC BAA-868)
Q98M18 7.33e-20 92 29 12 353 3 mlr0776 UPF0283 membrane protein mlr0776 Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
Q11IG3 2.29e-19 91 29 1 185 3 Meso_1416 UPF0283 membrane protein Meso_1416 Chelativorans sp. (strain BNC1)
B0CGI5 3.01e-19 90 30 3 179 3 BSUIS_A1077 UPF0283 membrane protein BSUIS_A1077 Brucella suis (strain ATCC 23445 / NCTC 10510)
Q89E33 1.18e-17 86 28 2 256 3 blr7254 UPF0283 membrane protein blr7254 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03720
Feature type CDS
Gene -
Product TIGR01620 family protein
Location 788439 - 789509 (strand: 1)
Length 1071 (nucleotides) / 356 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_999
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF05128 Domain of unknown function (DUF697)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3768 Function unknown (S) S Uncharacterized membrane protein YcjF, UPF0283 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08990 putative membrane protein - -

Protein Sequence

MNEPVKSRIDFDETPLSPAPQEELKPARQFTDAADIVFEQSIAIQSEQDAEGDAEALMNQVLKPRRSLWRKLIFVAGGLLGISAVAQLIQWVNDAWTGNDWTALGGIAATFLVLIAGVGSVLTEWRRLYRLRQRASEREAACALLQSHRIGGGRAFCEKLAEQASIPAHHPALQKWQSLLQSSHNDREVVTLYSQIVQPVLDEQARRAISRSAAESALMIAVSPLALVDMAFIAWRNIRLINRVAAIYGIELGYYSRLRLFKLVLLNIAFAGASELIREVGMDWLSQDITARLSARAAQGMGAGLLTARLGIKAMELCRPLPWIENDKPKLTDFRKQLLQQLKQAIPKGKTPEKSA

Flanking regions ( +/- flanking 50bp)

CATATCCGTATGGACAGTGCGATGGAATTTTTACTGGGAGATAAATTGTCATGAATGAGCCGGTAAAATCACGGATAGACTTTGACGAAACGCCGTTGTCACCTGCACCACAGGAAGAACTTAAACCCGCCCGTCAGTTTACGGATGCGGCAGATATTGTCTTTGAGCAATCAATTGCTATCCAGTCAGAACAGGACGCGGAAGGGGATGCGGAAGCCCTGATGAACCAGGTTCTGAAACCGCGCCGCAGCCTCTGGCGTAAGCTGATTTTTGTTGCCGGCGGATTGCTGGGGATCAGTGCTGTCGCGCAACTTATTCAGTGGGTGAATGATGCGTGGACAGGTAATGACTGGACGGCTCTCGGCGGTATAGCGGCAACATTTTTAGTCCTGATTGCGGGAGTCGGTTCGGTGCTGACAGAATGGCGGCGCCTGTACCGTTTGCGCCAGCGTGCCAGCGAGCGGGAAGCCGCTTGCGCGTTGTTGCAAAGCCACCGCATCGGAGGCGGGCGCGCATTTTGTGAAAAGCTGGCTGAGCAGGCAAGTATTCCGGCGCATCATCCTGCATTACAGAAGTGGCAGAGCCTGTTACAGAGCAGTCATAACGATCGCGAAGTGGTGACATTGTACAGTCAGATTGTCCAGCCGGTGTTGGATGAACAGGCACGCCGGGCAATAAGCCGTTCTGCGGCAGAATCTGCGCTGATGATCGCGGTCAGCCCGCTGGCGCTGGTGGATATGGCGTTTATTGCCTGGCGTAATATCCGCCTGATAAACCGGGTCGCAGCGATTTACGGCATCGAGCTGGGCTATTACAGCCGCTTACGTTTGTTTAAACTGGTCTTACTGAATATTGCGTTTGCAGGTGCTTCAGAGCTTATCCGCGAAGTGGGCATGGACTGGCTATCCCAGGACATTACCGCACGGCTCTCTGCCCGCGCGGCACAAGGCATGGGTGCCGGATTACTGACTGCCCGCCTGGGCATCAAAGCGATGGAGTTGTGCCGTCCGCTTCCCTGGATTGAAAATGATAAACCAAAACTGACCGATTTTCGCAAACAGTTGTTACAACAACTTAAACAGGCAATTCCTAAAGGTAAAACACCGGAAAAATCCGCCTGACAGCCGATTTACAGACCGGATGTGCATTTTGTGATGCCATCCGGTCTTAT