Homologs in group_1019

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05190 FBDBKF_05190 72.7 Morganella morganii S1 ompW outer membrane protein OmpW
EHELCC_12400 EHELCC_12400 72.7 Morganella morganii S2 ompW outer membrane protein OmpW
NLDBIP_12740 NLDBIP_12740 72.7 Morganella morganii S4 ompW outer membrane protein OmpW
LHKJJB_12600 LHKJJB_12600 72.7 Morganella morganii S3 ompW outer membrane protein OmpW
HKOGLL_11215 HKOGLL_11215 72.7 Morganella morganii S5 ompW outer membrane protein OmpW
F4V73_RS05645 F4V73_RS05645 75.1 Morganella psychrotolerans ompW outer membrane protein OmpW

Distribution of the homologs in the orthogroup group_1019

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1019

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A916 3.71e-82 246 56 3 215 3 ompW Outer membrane protein W Shigella flexneri
P0A915 3.71e-82 246 56 3 215 1 ompW Outer membrane protein W Escherichia coli (strain K12)
Q8ZP50 1.39e-78 237 56 4 216 3 ompW Outer membrane protein W Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z7E2 1.77e-78 237 56 3 215 3 ompW Outer membrane protein W Salmonella typhi
P17266 1.39e-71 219 51 4 220 3 ompW Outer membrane protein W Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q00595 7.17e-20 87 30 5 181 1 alkL Outer membrane protein AlkL Pseudomonas oleovorans
P55561 9.52e-19 84 35 4 157 3 NGR_a02570 Uncharacterized outer-membrane protein y4mB Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P0A146 1.88e-13 69 26 5 173 4 doxH Dibenzothiophene metabolism operon protein DoxH Pseudomonas sp. (strain C18)
P0A145 1.88e-13 69 26 5 173 3 pahQ Dibenzothiophene metabolism operon protein PahQ Pseudomonas aeruginosa
Q1RKL1 0.000186 44 23 6 163 3 RBE_0022 Putative outer membrane protein RBE_0022 Rickettsia bellii (strain RML369-C)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06515
Feature type CDS
Gene ompW
Product outer membrane protein OmpW
Location 1429387 - 1430028 (strand: -1)
Length 642 (nucleotides) / 213 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1019
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03922 OmpW family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3047 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein OmpW

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07275 outer membrane protein - -

Protein Sequence

MKKLSALILAAATLAPSISFAHQAGDFLFRAGTATVRPNTGSDTILGGHFDANNNTQLGLTFGYMVTDNIGVELLAATPFEHKVSLTGVGEIAKVKHLPPTLMAQYYFGGAEDKLRPYLGAGLNFTTFFDEKFNNNPAVGKLGLNDLDLKNSWGFAAQAGLDYNLDKNWMLNASVWWMNIETDVKFKDGDGNHYKVDTRLDPFVFMFGVGYRF

Flanking regions ( +/- flanking 50bp)

ATGGGTATATTTTAGCGGAGATTTTACTTATTACAGGAATGGGTTAAATAATGAAAAAACTTTCTGCGCTTATTCTAGCGGCTGCAACACTTGCACCGTCTATTTCTTTTGCTCATCAAGCGGGTGATTTTTTATTCCGTGCGGGTACTGCAACAGTTCGTCCTAATACAGGTTCAGATACTATATTAGGTGGGCATTTTGATGCTAATAACAACACTCAATTAGGTTTAACCTTTGGTTATATGGTAACTGATAATATTGGGGTTGAGTTATTAGCAGCAACACCTTTTGAGCATAAAGTTTCTTTAACTGGTGTGGGCGAAATTGCTAAAGTTAAACATTTACCACCAACATTAATGGCACAGTATTACTTTGGTGGTGCTGAAGATAAATTACGCCCTTATTTAGGTGCTGGTCTAAACTTTACGACCTTCTTTGATGAAAAATTCAATAATAATCCAGCGGTAGGCAAACTTGGATTAAATGATCTTGATCTTAAAAACTCTTGGGGCTTCGCAGCACAAGCAGGTTTAGACTATAACCTAGATAAAAACTGGATGCTGAACGCTTCTGTTTGGTGGATGAATATCGAAACCGATGTCAAATTTAAAGATGGCGATGGAAACCACTATAAAGTGGATACTCGCTTAGACCCATTTGTGTTTATGTTCGGTGTTGGTTATCGTTTCTAATTATTCTTGCAATAACAGAATATGCTATTAAGTATCAGCGGGGCAGTGGC