Homologs in group_409

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16960 FBDBKF_16960 26.9 Morganella morganii S1 udp uridine phosphorylase
EHELCC_16630 EHELCC_16630 26.9 Morganella morganii S2 udp uridine phosphorylase
NLDBIP_16840 NLDBIP_16840 26.9 Morganella morganii S4 udp uridine phosphorylase
LHKJJB_16630 LHKJJB_16630 26.9 Morganella morganii S3 udp uridine phosphorylase
HKOGLL_17595 HKOGLL_17595 26.9 Morganella morganii S5 udp uridine phosphorylase
F4V73_RS18430 F4V73_RS18430 26.5 Morganella psychrotolerans udp uridine phosphorylase
PMI_RS17555 PMI_RS17555 29.4 Proteus mirabilis HI4320 udp uridine phosphorylase

Distribution of the homologs in the orthogroup group_409

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_409

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AE12 0 714 71 0 473 1 amn AMP nucleosidase Escherichia coli (strain K12)
P0AE13 0 714 71 0 473 3 amn AMP nucleosidase Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05885
Feature type CDS
Gene -
Product AMP nucleosidase
Location 1289203 - 1290654 (strand: 1)
Length 1452 (nucleotides) / 483 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_409
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01048 Phosphorylase superfamily
PF10423 Bacterial AMP nucleoside phosphorylase N-terminus

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0775 Nucleotide transport and metabolism (F)
Coenzyme transport and metabolism (H)		 FH Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01241 AMP nucleosidase [EC:3.2.2.4] Purine metabolism
Metabolic pathways
Nucleotide metabolism		 -

Protein Sequence

MSKPHNPEIQKIINQLKQQYQNAVDALRNAIIMYAQDGKLPDIKQRAEGLFAYPQLTVHWYGDVKKEDKTRAYGRLSKSGTYSTTITNPTLFENYLTEQLQLIADAYHVSFEVTASKQEIPYPFVIDGTGIGFDRSMSASLAKYFPTTDLSKIGDDITDGLIDDSELLPLSHFDALRTDFSLARLKHYTGTLPEDVQPYILFTNYNRYVDEFVRWACAQVADKNSPYCALSCAGFQQITADTVDPEKLISDLTWKKYQMPAYHLIAKEGPGITLVNIGVGPSNAKTICDHLAVLRPHVWLMIGHCGGLRESQLLGDYVLAHAYLRDDHILDAVLPPDIPIPNIAEVQRALYDATKAISGKPGHEIKQRLRTGTVVTTDDRNWELRFSATSRRFSLSRAVAVDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANHFYEGAVSEHLQIGIHAIELLKDEEDKLHSRKLRTFNEPPFR

Flanking regions ( +/- flanking 50bp)

GAGCTTCTTGCTATGATGTGAAAAACGTGAGAATAAGTAGAGGCTCCTTTATGTCAAAACCTCATAACCCAGAAATTCAAAAAATTATTAATCAGTTAAAACAACAATATCAAAATGCTGTTGATGCCTTACGTAATGCTATTATTATGTATGCTCAAGATGGAAAATTACCTGATATAAAACAAAGGGCTGAAGGTCTATTTGCTTATCCGCAATTAACCGTACATTGGTATGGTGATGTTAAAAAAGAAGATAAAACAAGAGCTTATGGGCGTTTATCAAAATCAGGTACTTATTCTACGACTATCACCAATCCAACTTTATTTGAAAATTATTTAACTGAGCAACTGCAACTTATTGCGGATGCTTATCATGTCTCTTTTGAAGTGACGGCCTCAAAACAAGAGATACCATATCCTTTTGTCATTGATGGCACTGGCATTGGTTTTGATCGGTCAATGAGCGCCTCTTTAGCAAAATATTTTCCGACTACCGATCTCTCTAAAATTGGTGATGATATTACCGATGGTTTAATTGATGACAGCGAGCTTTTACCTCTTTCACATTTTGATGCACTACGGACGGATTTTTCTTTGGCTCGTTTAAAGCATTATACCGGAACTTTACCTGAAGATGTGCAACCTTATATTTTATTCACCAATTATAATCGCTATGTGGATGAGTTCGTTCGTTGGGCCTGTGCACAAGTTGCTGATAAAAATAGTCCATATTGCGCACTTTCTTGTGCAGGTTTTCAGCAAATAACCGCCGATACGGTTGATCCGGAAAAATTAATTTCTGATCTGACATGGAAAAAATATCAAATGCCCGCCTATCATTTAATTGCAAAAGAAGGGCCGGGAATAACATTAGTGAATATTGGTGTTGGGCCGTCAAACGCCAAAACAATTTGTGATCATCTGGCGGTTCTACGTCCTCATGTTTGGTTAATGATTGGTCATTGTGGCGGCTTAAGAGAAAGCCAATTATTAGGTGATTACGTTTTAGCTCATGCTTATTTACGAGATGATCATATTTTAGATGCTGTATTACCGCCAGATATTCCTATTCCTAATATTGCTGAAGTTCAGCGTGCACTTTATGATGCCACTAAAGCCATTAGCGGTAAGCCTGGACATGAAATCAAACAACGATTAAGAACAGGAACGGTTGTGACAACAGATGATCGTAATTGGGAATTACGTTTTTCAGCAACATCAAGGCGATTTAGTTTAAGTCGAGCCGTTGCCGTGGATATGGAAAGTGCCACTATTGCCGCTCAAGGTTATCGTTTTCGCGTTCCTTATGGCACTTTGTTATGTGTATCTGATAAACCGTTACATGGTGAAATAAAATTACCAGGACAAGCTAATCACTTTTATGAAGGTGCGGTATCAGAGCATTTGCAAATAGGTATTCATGCAATTGAGTTATTAAAAGACGAAGAGGATAAATTACATTCTCGTAAATTAAGAACCTTTAATGAGCCGCCATTTAGATAAGCCATAGCTAAAATTAATAAGATGAAAATTTATATACCCAATATCATTGA