Homologs in group_641

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02095 FBDBKF_02095 70.4 Morganella morganii S1 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
EHELCC_02565 EHELCC_02565 70.4 Morganella morganii S2 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
NLDBIP_00895 NLDBIP_00895 70.4 Morganella morganii S4 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
LHKJJB_01140 LHKJJB_01140 70.4 Morganella morganii S3 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
HKOGLL_01180 HKOGLL_01180 70.4 Morganella morganii S5 lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
F4V73_RS04460 F4V73_RS04460 70.7 Morganella psychrotolerans lpxM lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase

Distribution of the homologs in the orthogroup group_641

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_641

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24205 6.85e-153 434 61 0 314 1 lpxM Lipid A biosynthesis myristoyltransferase Escherichia coli (strain K12)
P59198 3.35e-152 432 61 0 314 2 lpxM1 Lipid A biosynthesis acyltransferase 1 Shigella flexneri
O06659 2.03e-137 395 58 1 309 2 lpxM2 Lipid A biosynthesis acyltransferase 2 Shigella flexneri
P44567 4.41e-107 318 46 1 305 3 lpxM Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0ACV0 1.34e-26 109 26 6 304 1 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli (strain K12)
P0ACV1 1.34e-26 109 26 6 304 3 lpxL Lipid A biosynthesis lauroyltransferase Escherichia coli O157:H7
P0ACV3 3.1e-24 103 25 7 306 3 lpxP Lipid A biosynthesis acyltransferase Shigella flexneri
P0ACV2 3.1e-24 103 25 7 306 1 lpxP Lipid A biosynthesis palmitoleoyltransferase Escherichia coli (strain K12)
P45239 1.8e-16 82 23 10 307 3 lpxL Lipid A biosynthesis acyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05570
Feature type CDS
Gene lpxM
Product lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase
Location 1214640 - 1215614 (strand: 1)
Length 975 (nucleotides) / 324 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_641
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03279 Bacterial lipid A biosynthesis acyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1560 Lipid transport and metabolism (I) I Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02560 lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] Lipopolysaccharide biosynthesis
Metabolic pathways		 KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type

Protein Sequence

MNKEKDTDSKAGYVPTFHRAYLHPRHWGTWFGAGVLCALAYMPVKWRDPLLASIGRFVGRKAKSARRRADINLRYCFPHWDKAQREDVLDKMFETAPQSFVMLADLCLRGAKHTLQRTSWEGIEIIERLKAQGRNVIFMVPHGWAVDVPAMLLAAKGQKMAAMFHHQKDPVTDYLWNKARYHFGGRLHSREAGIKPFISTVRQGFWGYYLPDQDHGAEHSQFVDFFGTYKATLPAIGRLMKVCRAAIVPLFPVYCHKTHQLKIIIREPMDDIEGQDDRYIARRMNEELEALVSPTPEQYTWILKLLKTRKEGEIEPYARENILD

Flanking regions ( +/- flanking 50bp)

TTTAATGATTTTTACGCCTATTTAGAGGTGTCAGTTCAGCGAGTTATCTGATGAATAAAGAAAAAGATACAGATAGTAAAGCGGGTTATGTACCGACTTTTCACCGCGCCTATTTGCATCCTCGTCATTGGGGAACCTGGTTTGGTGCAGGCGTATTGTGTGCATTAGCGTATATGCCGGTAAAATGGCGTGATCCGCTCCTTGCTTCTATAGGTCGTTTTGTTGGGCGTAAAGCGAAAAGTGCCAGACGTCGTGCAGATATCAATTTAAGATATTGTTTTCCTCACTGGGATAAAGCACAACGAGAAGATGTGCTTGATAAAATGTTTGAAACAGCGCCACAGTCTTTCGTGATGCTTGCAGATCTTTGTTTAAGAGGGGCTAAACACACATTACAGCGTACCTCTTGGGAAGGGATAGAGATTATAGAGCGCTTAAAAGCACAAGGGCGTAATGTTATTTTTATGGTACCGCATGGATGGGCTGTTGATGTACCTGCCATGTTATTGGCAGCTAAAGGGCAAAAAATGGCAGCAATGTTTCACCACCAAAAAGATCCGGTGACTGATTATTTATGGAATAAAGCACGTTACCATTTCGGCGGACGTTTACACTCGCGCGAAGCGGGGATAAAACCTTTTATTTCAACGGTGCGCCAAGGGTTTTGGGGGTATTATTTACCTGACCAAGATCATGGTGCAGAGCATAGTCAATTTGTGGATTTTTTTGGTACCTATAAAGCCACATTACCGGCGATTGGCCGATTAATGAAAGTATGCAGAGCGGCCATTGTGCCACTGTTTCCTGTTTACTGTCATAAAACGCATCAACTAAAGATTATTATCCGTGAGCCGATGGATGATATAGAAGGGCAAGATGATCGTTATATTGCGCGTCGGATGAATGAAGAGCTAGAAGCGTTAGTCTCACCAACACCAGAGCAATATACTTGGATCTTGAAACTATTAAAAACGCGTAAAGAGGGGGAAATAGAACCTTATGCGCGTGAGAATATCCTAGACTAGTCCATTGCTGGTGAACGAATAGGAAGATAAAAAAACGGGCACTATTTAAA