Homologs in group_621

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01980 FBDBKF_01980 44.3 Morganella morganii S1 - lipoprotein
EHELCC_02450 EHELCC_02450 44.3 Morganella morganii S2 - lipoprotein
NLDBIP_01010 NLDBIP_01010 44.3 Morganella morganii S4 - lipoprotein
LHKJJB_01025 LHKJJB_01025 44.3 Morganella morganii S3 - lipoprotein
HKOGLL_01065 HKOGLL_01065 44.3 Morganella morganii S5 - lipoprotein
F4V73_RS04325 F4V73_RS04325 47.5 Morganella psychrotolerans - lipoprotein

Distribution of the homologs in the orthogroup group_621

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_621

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P40822 1.67e-51 166 43 0 182 3 yceB Uncharacterized lipoprotein YceB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AB27 3.11e-49 160 42 0 182 3 yceB Uncharacterized lipoprotein YceB Shigella flexneri
P0AB26 3.11e-49 160 42 0 182 1 yceB Uncharacterized lipoprotein YceB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05325
Feature type CDS
Gene -
Product lipoprotein
Location 1164172 - 1164726 (strand: -1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_621
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07273 Protein of unknown function (DUF1439)

Protein Sequence

MKAIFLTALFVLTSLVTGCDQIRQFDVSEKVINDYLSQKSGLQKHIGEDGVVSADITLSDLAIQIGRTEPGKVSFSGSASLKIDSLFGKTGANVNLTLSGQPFYQAELGAIYIKSMKIDSYKVSPEKMEPVVMALKPYLDTTIATYFDNQPVYVLNPEKNSAEAAAFKLAKGIEVKPGKFVIQL

Flanking regions ( +/- flanking 50bp)

ACCCCATAGAGATCAGGTACACTTAGCGTGTTTACCATCAAGGAGTGTGTATGAAAGCTATTTTTTTGACTGCTTTATTTGTATTAACTAGTTTAGTGACTGGCTGTGATCAAATCAGACAATTTGATGTCAGTGAAAAAGTAATTAATGACTATCTGAGTCAAAAATCGGGATTACAAAAACACATTGGGGAAGACGGTGTTGTTTCTGCCGATATCACATTAAGTGATTTAGCGATCCAAATTGGTCGTACTGAGCCTGGAAAAGTGAGCTTTTCTGGTAGTGCTTCTCTTAAAATTGATTCTTTGTTTGGCAAAACTGGCGCGAATGTGAATTTAACTTTATCAGGCCAACCCTTTTATCAAGCAGAGCTTGGGGCGATATATATCAAGTCAATGAAAATTGATAGCTATAAAGTGTCTCCTGAAAAAATGGAGCCGGTTGTAATGGCATTAAAACCTTACTTAGATACGACTATTGCGACTTATTTTGATAATCAGCCTGTTTATGTGCTCAACCCTGAAAAAAATAGTGCAGAAGCGGCTGCCTTTAAATTAGCAAAAGGGATTGAAGTTAAACCGGGTAAGTTTGTGATCCAACTTTAATCACAAAATGGTTAATTAAATATTTTTATCGTAATAAGGGCATTGGTTTT