Homologs in group_621

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01980 FBDBKF_01980 100.0 Morganella morganii S1 - lipoprotein
EHELCC_02450 EHELCC_02450 100.0 Morganella morganii S2 - lipoprotein
NLDBIP_01010 NLDBIP_01010 100.0 Morganella morganii S4 - lipoprotein
LHKJJB_01025 LHKJJB_01025 100.0 Morganella morganii S3 - lipoprotein
F4V73_RS04325 F4V73_RS04325 87.6 Morganella psychrotolerans - lipoprotein
PMI_RS05325 PMI_RS05325 44.3 Proteus mirabilis HI4320 - lipoprotein

Distribution of the homologs in the orthogroup group_621

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_621

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AB27 3.51e-59 186 45 1 186 3 yceB Uncharacterized lipoprotein YceB Shigella flexneri
P0AB26 3.51e-59 186 45 1 186 1 yceB Uncharacterized lipoprotein YceB Escherichia coli (strain K12)
P40822 3.75e-59 186 45 1 185 3 yceB Uncharacterized lipoprotein YceB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01065
Feature type CDS
Gene -
Product lipoprotein
Location 189154 - 189711 (strand: -1)
Length 558 (nucleotides) / 185 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_621
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07273 Protein of unknown function (DUF1439)

Protein Sequence

MRLFLFTAALVAATVLTGCDKLTEISVSEETINSAVAENIHLNKQIGMDGVADADFTLEKLLTEIGREEPGKVKLTAIGSLKLVSLFGSRDFTISMSLRAAPYFDATSGSIYMRDIEITNYTLDPDKWDTLISALIPYLNHTLSTFFNITPVYVLNGDNTAEAAAKKFAKGIEIRPGRIVIPLTE

Flanking regions ( +/- flanking 50bp)

ATTTGCCGCAGCACAGGTTAGTATCGGGTGGTATACAACAGGAGATACCGATGAGATTATTCCTTTTTACCGCGGCACTGGTCGCAGCAACAGTTTTAACCGGCTGCGATAAATTAACCGAAATCAGTGTCAGTGAAGAGACCATTAACAGTGCGGTGGCAGAGAATATCCATCTGAATAAACAGATTGGTATGGATGGTGTGGCAGATGCGGATTTTACCCTGGAAAAACTGCTCACCGAGATTGGCCGTGAAGAGCCCGGCAAAGTAAAACTGACGGCAATCGGCTCGCTGAAGCTGGTTTCGCTGTTTGGTTCACGGGATTTCACTATTTCAATGTCTCTCCGCGCCGCACCGTATTTCGATGCCACCAGCGGGTCAATCTATATGCGGGATATTGAAATAACCAATTACACGCTGGATCCGGACAAATGGGATACTCTGATTTCCGCGCTGATCCCTTATCTCAACCATACGCTGAGCACCTTTTTCAATATCACCCCGGTGTATGTGCTGAATGGCGATAATACAGCCGAAGCGGCTGCGAAGAAGTTTGCCAAGGGCATTGAAATTCGGCCGGGCCGGATCGTTATCCCGTTAACCGAATAATTTCGATTAAAAATTTTAATTGTGATAGTAAATTATTAATTCACTAAATT