Homologs in group_3645

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4 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS05990 F4V73_RS05990 31.5 Morganella psychrotolerans - spore coat U domain-containing protein
F4V73_RS06005 F4V73_RS06005 22.5 Morganella psychrotolerans - spore coat U domain-containing protein
PMI_RS05175 PMI_RS05175 49.4 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS05185 PMI_RS05185 29.0 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3645

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3645

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05180
Feature type CDS
Gene -
Product fimbrial protein
Location 1132360 - 1132893 (strand: 1)
Length 534 (nucleotides) / 177 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3645
Orthogroup size 5
N. genomes 2

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MVKKSCFMFSVILFPIYVGATSFTSNVTGGTVTSNLSMTVKASCSTTVGDVTFGDQSAGDIKKGAVAEKVISLAIVCDTKMTNYTLAFTAADGVKDVANGIINTKLNSTVGYQLKWGDSTVKPVDTAITINGSTITPTNKPTQESFTIPIKVKPVALGETVSPGAANTALNIKLTFN

Flanking regions ( +/- flanking 50bp)

CTAATACTGCATTAACGATTAATATAAAGTTAAATTAAATGGAGTTAACGATGGTAAAAAAATCTTGTTTTATGTTTAGCGTTATTTTATTTCCTATTTATGTTGGAGCAACAAGTTTCACCTCTAATGTTACTGGTGGAACAGTCACTTCAAATTTAAGTATGACAGTGAAAGCCTCTTGCAGTACAACGGTTGGTGATGTGACATTTGGTGACCAAAGCGCGGGTGATATTAAAAAAGGAGCTGTCGCAGAGAAGGTAATATCATTGGCTATTGTATGCGATACAAAAATGACTAATTACACATTAGCATTTACGGCGGCTGATGGTGTTAAAGATGTAGCAAATGGCATTATTAATACTAAATTAAATTCAACGGTGGGTTATCAACTTAAGTGGGGAGATTCGACCGTTAAACCTGTGGATACAGCAATTACTATTAATGGCAGTACAATTACCCCAACAAACAAGCCAACGCAAGAAAGTTTTACTATTCCAATCAAAGTTAAACCTGTTGCTCTTGGGGAGACTGTTTCTCCTGGTGCAGCAAATACGGCGTTAAACATTAAACTAACTTTCAATTAGTTGAGGGACTATGTGCAAATCTATATTGCTTACCAGCCTGTTAATCTTTA