Homologs in group_414

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17985 FBDBKF_17985 33.3 Morganella morganii S1 - Fimbrial protein
EHELCC_06350 EHELCC_06350 33.3 Morganella morganii S2 - Fimbrial protein
NLDBIP_06670 NLDBIP_06670 33.3 Morganella morganii S4 - Fimbrial protein
LHKJJB_19270 LHKJJB_19270 33.3 Morganella morganii S3 - Fimbrial protein
HKOGLL_04720 HKOGLL_04720 33.3 Morganella morganii S5 - Fimbrial protein
PMI_RS02650 PMI_RS02650 36.0 Proteus mirabilis HI4320 ucaA uroepithelial cell adherence major pilin UcaA
PMI_RS12930 PMI_RS12930 33.3 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_414

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_414

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P18103 2.8e-14 70 37 5 122 3 fanC K99 fimbrial protein Escherichia coli
P25394 9.54e-14 68 30 5 176 3 fedA F107 fimbrial protein Escherichia coli
P21413 8.61e-05 44 40 2 66 3 fasA Fimbrial protein 987P Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05160
Feature type CDS
Gene -
Product fimbrial protein
Location 1127562 - 1128080 (strand: 1)
Length 519 (nucleotides) / 172 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_414
Orthogroup size 8
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKKLLLPLVMSSALFSGYTLANTGEVQFIGAVTSETCDIDTEIGGLVKSTIDLGKMTTADTNGKYVEFELVPRTDECLKKTSGQVGWQSAGFTNSGLANMKGTAGGVSIQLTAINSTTPNQDVTYNNQSVDFGNGNDPIGNMKFKARMTATAGQTVTEGTVISSATYAVAYK

Flanking regions ( +/- flanking 50bp)

ATTCTGATTTAATTGTTGTTAATTAATATTTAATATATGGGGAAGTTTAAATGAAAAAATTATTATTACCTTTAGTCATGAGCAGTGCATTATTTAGTGGATATACATTAGCTAATACCGGTGAAGTTCAATTTATTGGTGCGGTTACGTCGGAAACGTGTGATATTGATACAGAAATTGGTGGTTTAGTTAAATCAACAATCGATTTGGGTAAAATGACCACTGCAGATACCAATGGTAAATATGTTGAATTTGAATTAGTCCCTCGTACGGATGAATGCCTGAAAAAAACCAGTGGCCAAGTTGGTTGGCAAAGTGCAGGTTTTACTAATTCAGGTCTTGCTAATATGAAAGGTACTGCCGGTGGTGTATCTATTCAATTAACAGCGATTAATTCAACCACACCTAATCAGGATGTAACTTATAATAACCAAAGTGTTGATTTTGGTAATGGTAATGATCCAATTGGTAATATGAAATTTAAAGCAAGAATGACAGCAACGGCAGGTCAAACTGTTACAGAGGGTACTGTAATTTCAAGCGCAACTTATGCAGTAGCTTATAAATAATGTTTCATTATTTAATTTTATAATGTCTATTATCAATGTAGTTACTTTTA