Homologs in group_2341

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6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18645 FBDBKF_18645 30.0 Morganella morganii S1 - phage terminase small subunit P27 family
FBDBKF_19420 FBDBKF_19420 45.8 Morganella morganii S1 - phage terminase small subunit P27 family
EHELCC_15220 EHELCC_15220 30.0 Morganella morganii S2 - phage terminase small subunit P27 family
NLDBIP_15750 NLDBIP_15750 30.0 Morganella morganii S4 - phage terminase small subunit P27 family
LHKJJB_16090 LHKJJB_16090 30.0 Morganella morganii S3 - phage terminase small subunit P27 family
HKOGLL_15210 HKOGLL_15210 30.0 Morganella morganii S5 - phage terminase small subunit P27 family

Distribution of the homologs in the orthogroup group_2341

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2341

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04525
Feature type CDS
Gene -
Product phage terminase small subunit P27 family
Location 1005004 - 1005471 (strand: 1)
Length 468 (nucleotides) / 155 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2341
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF05119 Phage terminase, small subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3747 Mobilome: prophages, transposons (X) X Phage terminase, small subunit

Protein Sequence

MAGRRPKPTHLKVVTGNPGKRKLNDKEPQPKREIPSPPEHLTDWGKMAWAKLTLLLDGMGVLTVADTLALERLCDIYADILQLRDTIAIEGRTYTTKTQLGDFLIKANPAVAMLADADRRFKSYLVEFGLTPAARSKVKMDGGEEEEDPLNQYFG

Flanking regions ( +/- flanking 50bp)

CATTTGTGTGCACAATCGCGAAATGAAAAGTTTTTTTCTGGGAGGTTCCGATGGCAGGAAGACGCCCGAAACCGACCCACTTGAAGGTGGTCACCGGTAATCCGGGAAAACGAAAACTCAACGATAAAGAACCCCAACCCAAACGTGAAATTCCAAGCCCACCCGAACATTTAACGGATTGGGGGAAAATGGCGTGGGCAAAATTAACCTTATTACTCGATGGAATGGGCGTTTTAACCGTGGCTGACACGCTGGCATTAGAACGGCTGTGTGATATCTACGCCGATATTCTTCAATTGCGAGACACCATTGCGATTGAAGGTCGGACATACACCACAAAAACGCAATTAGGGGATTTTTTAATTAAAGCGAATCCTGCCGTTGCCATGTTGGCTGATGCAGATCGCCGTTTTAAAAGTTATTTAGTCGAGTTTGGTTTAACCCCCGCCGCTCGTTCGAAGGTGAAGATGGATGGTGGAGAAGAAGAGGAAGATCCGCTCAACCAATATTTCGGTTGATCCCGCAACACAATACGCGCAAGACGTGCATCAAGGCAAAATCTTAGCGG