Homologs in group_3379

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12425 FBDBKF_12425 64.2 Morganella morganii S1 - Prophage protein
EHELCC_19190 EHELCC_19190 64.2 Morganella morganii S2 - Prophage protein
NLDBIP_19160 NLDBIP_19160 64.2 Morganella morganii S4 - Prophage protein
LHKJJB_19050 LHKJJB_19050 64.2 Morganella morganii S3 - Prophage protein

Distribution of the homologs in the orthogroup group_3379

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3379

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76512 6.35e-41 135 54 1 119 4 yfdP Uncharacterized protein YfdP Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04430
Feature type CDS
Gene -
Product hypothetical protein
Location 988902 - 989276 (strand: -1)
Length 375 (nucleotides) / 124 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3379
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MSQEDRKTNVPDFLSELDAGVFENKVSAVLNDVALGVLNNGGKGKVTIELDFARLSNSMEEKRVEITHKLKFSAPTPRGKRAEEDTTKTPMYVGKGGKLTIMQEDQGQLFSLQGQPDGKLKSVN

Flanking regions ( +/- flanking 50bp)

TCGCTAGTGCCCTTTCTTATTGTGTGAAGTGATAACGTGAGGTTATAGAAATGAGCCAAGAAGATCGTAAGACAAATGTCCCTGACTTTCTTTCCGAATTGGACGCTGGCGTTTTTGAAAATAAAGTCTCTGCTGTTTTAAATGATGTGGCTTTAGGCGTTTTAAATAATGGTGGAAAAGGCAAAGTCACTATTGAATTAGATTTTGCTCGCCTTAGTAATTCAATGGAAGAAAAACGAGTTGAAATAACTCATAAACTTAAGTTCTCTGCACCAACACCACGCGGGAAACGGGCTGAAGAAGATACTACTAAAACACCAATGTACGTAGGTAAAGGTGGTAAGTTGACCATTATGCAAGAAGACCAAGGTCAATTATTTTCTTTGCAAGGTCAGCCCGACGGGAAATTAAAATCCGTTAATTAGTTTCCTTATTTTTAATTAAACCTATCCATTTAATTTAATGCTTTTAAATA