Homologs in group_3379

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_19190 EHELCC_19190 97.5 Morganella morganii S2 - Prophage protein
NLDBIP_19160 NLDBIP_19160 97.5 Morganella morganii S4 - Prophage protein
LHKJJB_19050 LHKJJB_19050 97.5 Morganella morganii S3 - Prophage protein
PMI_RS04430 PMI_RS04430 64.2 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3379

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3379

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76512 4.96e-36 122 55 0 114 4 yfdP Uncharacterized protein YfdP Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12425
Feature type CDS
Gene -
Product Prophage protein
Location 8287 - 8649 (strand: 1)
Length 363 (nucleotides) / 120 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3379
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MSENNRMTSVPDFLSELDAGVFENKLSAALNEVAFGTNKNGGTGEVHVIFKFTQSDEDRVKISHKLKMVTPTKRGKKSEEDTTETPMWVGKGGKLTILPEDQGQLFGIDGSVDGKLKAVK

Flanking regions ( +/- flanking 50bp)

CCGCTGGTGGACTTATCTTTGTGTGAAGAGACAACGAAAGGAAAAACGCAATGAGCGAAAATAACCGCATGACCAGTGTACCGGACTTTCTCTCCGAGTTAGACGCCGGTGTGTTTGAAAACAAACTTTCTGCTGCACTGAATGAAGTCGCTTTTGGTACCAATAAGAACGGCGGTACCGGTGAAGTACATGTGATTTTTAAATTCACTCAGTCAGATGAAGACCGCGTGAAAATATCTCACAAACTGAAAATGGTTACCCCGACCAAGCGCGGTAAAAAATCGGAAGAGGATACAACCGAAACACCGATGTGGGTTGGTAAAGGTGGGAAACTCACTATTCTGCCGGAAGACCAGGGGCAATTATTTGGTATTGACGGAAGTGTTGACGGGAAATTAAAAGCCGTTAAGTAATTTCCTTTTTTTTAAATAAACCATTCCATTCACTTTTTATGTTTTTAATT