Homologs in group_3069

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18745 FBDBKF_18745 59.0 Morganella morganii S1 - Excisionase
EHELCC_15320 EHELCC_15320 59.0 Morganella morganii S2 - Excisionase
NLDBIP_15850 NLDBIP_15850 59.0 Morganella morganii S4 - Excisionase
LHKJJB_15990 LHKJJB_15990 59.0 Morganella morganii S3 - Excisionase
HKOGLL_15110 HKOGLL_15110 59.0 Morganella morganii S5 - Excisionase

Distribution of the homologs in the orthogroup group_3069

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3069

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27079 3.87e-28 99 53 0 78 4 xis Excisionase Enterobacteria phage P21
P75970 1.32e-18 75 45 0 81 4 xisE Prophage excisionase-like protein Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS04390
Feature type CDS
Gene -
Product excisionase
Location 985446 - 985697 (strand: -1)
Length 252 (nucleotides) / 83 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3069
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF07825 Excisionase-like protein

Protein Sequence

MSRMVSLEAWAMLEFGEESPSITVLQKYARNNLIAPPAMKVGRKWMVDREARYVGYLSLPKIPTKSTERLQRIISDGCQTANP

Flanking regions ( +/- flanking 50bp)

CATTAACGAATATCTATTTAAACTGTGTACGGACAGTGTGGAGAGAAAATATGTCAAGAATGGTAAGTCTTGAGGCGTGGGCTATGTTGGAATTTGGTGAAGAATCCCCCAGCATAACGGTATTACAAAAATACGCAAGAAATAATCTTATCGCACCTCCAGCAATGAAAGTTGGTAGAAAGTGGATGGTCGATAGAGAAGCTCGTTATGTGGGTTATTTATCTTTACCAAAAATTCCGACTAAATCAACGGAGCGACTTCAGAGGATAATTTCAGATGGCTGCCAGACCGCGAACCCATAAAATAACCATTCCTAACTTATACCGTAAATTAGATAAGCGTAATGGAAAAA