Homologs in group_551

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01340 FBDBKF_01340 38.6 Morganella morganii S1 - Fis family transcriptional regulator
EHELCC_00205 EHELCC_00205 38.6 Morganella morganii S2 - Fis family transcriptional regulator
NLDBIP_03255 NLDBIP_03255 38.6 Morganella morganii S4 - Fis family transcriptional regulator
LHKJJB_04770 LHKJJB_04770 38.6 Morganella morganii S3 - Fis family transcriptional regulator
HKOGLL_02275 HKOGLL_02275 38.6 Morganella morganii S5 - Fis family transcriptional regulator
F4V73_RS02330 F4V73_RS02330 43.0 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_551

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_551

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03635
Feature type CDS
Gene -
Product helix-turn-helix domain-containing protein
Location 817147 - 817935 (strand: -1)
Length 789 (nucleotides) / 262 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_551
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3829 Transcription (K)
Signal transduction mechanisms (T)		 KT RocR-type transcriptional regulator, contains PAS, AAA-type ATPase, and DNA-binding Fis domains

Protein Sequence

MKARLKNALALLECHDVETLAVQFLKYSFFRSSLSGLIISLMNKAENKLESWNIDLTLQVQSHFLDTDITDADHPLIQLLFKGEPVFWQNLQQGSYINNAAMRGFISQLPVNTGLYSLPIYDVNHKACGTIILLGQAEELENIEQGIFPIYCELFNHQLKHLFELSNMQQKISYLQYINQLQREKETTLNETLDKLTASVATIALPTIQIKGVNDLEVAIENYEKEILLDKQQELKGDINAMAEQLSISKRALIYKLKKYGV

Flanking regions ( +/- flanking 50bp)

TCCGCTTAGCGACTGAAAATGATGAGTTTATTGCGGAGGTTAATTAAGCAATGAAAGCGAGACTAAAAAATGCGCTTGCACTACTAGAATGTCATGATGTAGAGACGCTAGCTGTTCAATTTCTAAAATATAGCTTTTTTCGTAGCTCACTGAGTGGGTTAATTATTTCGTTAATGAATAAAGCTGAAAATAAATTGGAAAGTTGGAATATCGACTTAACGCTTCAAGTGCAAAGCCATTTTTTAGATACCGATATTACCGATGCAGATCACCCTTTAATTCAACTGCTATTTAAGGGTGAACCTGTATTTTGGCAAAACTTACAACAAGGTAGTTATATTAATAATGCTGCTATGCGCGGTTTTATTTCACAGCTTCCGGTGAACACCGGATTGTATAGTTTGCCTATCTATGATGTTAACCATAAAGCATGTGGCACGATTATTCTTTTAGGGCAAGCTGAAGAGCTAGAAAATATCGAGCAAGGTATTTTCCCTATTTATTGTGAACTATTTAATCATCAATTAAAGCATCTTTTTGAATTATCAAATATGCAACAAAAAATCTCTTACTTGCAATATATCAATCAATTACAAAGGGAAAAAGAAACCACGCTTAATGAAACGTTAGATAAATTAACCGCATCTGTAGCGACTATTGCACTTCCTACCATACAAATCAAAGGAGTTAATGATTTAGAAGTTGCTATAGAAAATTATGAAAAAGAAATTTTATTAGATAAACAGCAAGAATTGAAAGGAGATATTAACGCCATGGCAGAACAGCTTAGTATTTCTAAACGAGCGTTAATATATAAATTGAAGAAATACGGAGTATAAAATGAACGTATTGAAAATCTTTTTCTGCACATTACTCCCTTTACTCTTCA