Homologs in group_1182

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06815 FBDBKF_06815 74.5 Morganella morganii S1 lrgB CidB/LrgB family autolysis modulator
EHELCC_04155 EHELCC_04155 74.5 Morganella morganii S2 lrgB CidB/LrgB family autolysis modulator
NLDBIP_04155 NLDBIP_04155 74.5 Morganella morganii S4 lrgB CidB/LrgB family autolysis modulator
LHKJJB_09985 LHKJJB_09985 74.5 Morganella morganii S3 lrgB CidB/LrgB family autolysis modulator
HKOGLL_08990 HKOGLL_08990 74.5 Morganella morganii S5 lrgB CidB/LrgB family autolysis modulator
F4V73_RS00955 F4V73_RS00955 73.6 Morganella psychrotolerans - CidB/LrgB family autolysis modulator

Distribution of the homologs in the orthogroup group_1182

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1182

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AD20 2.04e-121 347 74 0 227 3 yohK Inner membrane protein YohK Shigella flexneri
P0AD19 2.04e-121 347 74 0 227 1 yohK Inner membrane protein YohK Escherichia coli (strain K12)
P45146 3.38e-51 169 44 0 216 3 HI_1298 Uncharacterized protein HI_1298 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P42102 3.73e-39 138 37 1 207 3 yxaC Uncharacterized protein YxaC Bacillus subtilis (strain 168)
P39590 3.78e-38 135 36 0 219 3 ywbG Uncharacterized protein YwbG Bacillus subtilis (strain 168)
Q6GDQ8 3.12e-34 125 31 3 218 3 cidB Holin-like protein CidB Staphylococcus aureus (strain MRSA252)
P60640 3.78e-34 125 31 3 218 3 cidB Holin-like protein CidB Staphylococcus aureus (strain MW2)
Q6G6D4 3.78e-34 125 31 3 218 3 cidB Holin-like protein CidB Staphylococcus aureus (strain MSSA476)
P60638 3.78e-34 125 31 3 218 3 cidB Holin-like protein CidB Staphylococcus aureus (strain N315)
P60637 3.78e-34 125 31 3 218 3 cidB Holin-like protein CidB Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HD11 3.78e-34 125 31 3 218 3 cidB Holin-like protein CidB Staphylococcus aureus (strain COL)
P60639 3.78e-34 125 31 3 218 1 cidB Holin-like protein CidB Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q8CR39 2.58e-32 120 31 0 210 3 cidB Holin-like protein CidB Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HL71 2.58e-32 120 31 0 210 3 cidB Holin-like protein CidB Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
A9VTH6 3.21e-31 117 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus mycoides (strain KBAB4)
Q6HAJ7 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q630G4 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain ZK / E33L)
Q814J3 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B9ISZ3 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain Q1)
B7HZC3 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain AH187)
B7HGA1 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain B4264)
C1ER33 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain 03BB102)
B7IRX1 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain G9842)
Q72X07 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain ATCC 10987 / NRS 248)
B7JIF5 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus cereus (strain AH820)
Q81JL5 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus anthracis
C3LGP7 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus anthracis (strain CDC 684 / NRRL 3495)
C3P2J6 6.62e-31 116 34 0 197 3 lrgB Antiholin-like protein LrgB Bacillus anthracis (strain A0248)
A7GVI2 1.89e-29 113 33 0 200 3 lrgB Antiholin-like protein LrgB Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
Q4A012 5.97e-27 106 32 1 216 3 lrgB Antiholin-like protein LrgB Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q5HLG0 1.2e-25 103 31 1 211 3 lrgB Antiholin-like protein LrgB Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q8CN53 1.7e-25 102 31 1 211 3 lrgB Antiholin-like protein LrgB Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
P94516 7.65e-25 100 31 1 191 3 lrgB Antiholin-like protein LrgB Bacillus subtilis (strain 168)
P60644 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain MW2)
A8Z0M6 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain USA300 / TCH1516)
Q6GCK9 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain MSSA476)
Q6GK49 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain MRSA252)
P60642 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain N315)
P60641 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain Mu50 / ATCC 700699)
A6QDN7 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain Newman)
Q5HJB3 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain COL)
Q2YV65 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain bovine RF122 / ET3-1)
A5IPD2 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain JH9)
P60643 2.1e-23 97 31 1 204 1 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FK07 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain USA300)
A6TY48 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain JH1)
A7WXS7 2.1e-23 97 31 1 204 3 lrgB Antiholin-like protein LrgB Staphylococcus aureus (strain Mu3 / ATCC 700698)
Q9FVQ4 2.35e-07 54 22 1 158 1 PLGG1 Plastidal glycolate/glycerate translocator 1, chloroplastic Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03175
Feature type CDS
Gene -
Product CidB/LrgB family autolysis modulator
Location 700947 - 701648 (strand: -1)
Length 702 (nucleotides) / 233 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1182
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04172 LrgB-like family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1346 Cell wall/membrane/envelope biogenesis (M) M Putative effector of murein hydrolase

Protein Sequence

MLILMNIWWSLPLTLIIFYLARKLAARFKWPILNPLLIAIVVIIPILLVTHTAYEDYFAGSRILNDLLQPAVVALAIPLYQQLHQIRAQWKSLISICFIGSIAAMASGTAIALWAGATPEIAASILPKSVTTPIAMAVADSIGGIPAISAACVIAVGILGAIFGHTLFKILRIPTHASRGLAMGTVSHAVGTARAAEIDYIEGAYSSLALMTCGIITSLTAPFIFPFILHLFS

Flanking regions ( +/- flanking 50bp)

GAATTAGCAGAACAACAAGACGACGACAGAGCGTTAAGTGAGAAGAAAAAATGTTAATATTAATGAATATTTGGTGGTCATTACCGCTAACACTTATTATTTTCTACTTAGCACGTAAACTGGCGGCTCGATTTAAATGGCCTATTTTAAATCCGTTATTGATTGCTATTGTTGTTATTATTCCTATTTTATTAGTGACACACACCGCTTATGAGGATTATTTTGCCGGAAGTCGTATCCTTAACGACTTGTTGCAACCAGCTGTTGTTGCTTTAGCTATTCCTTTATATCAACAATTACACCAAATACGCGCACAATGGAAATCGTTAATTAGTATCTGCTTTATTGGTAGTATCGCCGCCATGGCTAGTGGTACAGCGATTGCATTATGGGCTGGCGCTACTCCTGAAATTGCCGCCTCCATTTTGCCTAAATCGGTAACAACCCCTATCGCAATGGCTGTTGCGGATTCCATAGGTGGTATTCCTGCAATCAGTGCTGCATGTGTTATTGCAGTAGGTATTTTAGGTGCCATTTTTGGTCATACGCTATTTAAAATATTACGTATTCCAACTCACGCTTCTCGTGGTTTAGCGATGGGAACCGTCTCTCACGCAGTGGGTACCGCAAGAGCGGCTGAAATCGATTATATTGAAGGGGCATATAGTTCATTAGCATTAATGACTTGCGGTATTATTACTTCACTTACCGCACCTTTTATTTTTCCTTTTATTTTGCACCTTTTTAGCTAATTAGCTAATTAGCTAAATCAATAGAACACATAAAAAACCTTCGTTCAGAG