Homologs in group_1171

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06740 FBDBKF_06740 57.3 Morganella morganii S1 ytcJ putative amidohydrolase YtcJ
EHELCC_04230 EHELCC_04230 57.3 Morganella morganii S2 ytcJ putative amidohydrolase YtcJ
NLDBIP_04230 NLDBIP_04230 57.3 Morganella morganii S4 ytcJ putative amidohydrolase YtcJ
LHKJJB_10060 LHKJJB_10060 57.3 Morganella morganii S3 ytcJ putative amidohydrolase YtcJ
HKOGLL_08915 HKOGLL_08915 57.3 Morganella morganii S5 ytcJ putative amidohydrolase YtcJ
F4V73_RS00890 F4V73_RS00890 56.6 Morganella psychrotolerans - amidohydrolase

Distribution of the homologs in the orthogroup group_1171

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1171

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q68AP4 6.16e-35 141 26 13 574 1 nfdA N-substituted formamide deformylase Arthrobacter pascens
A0A1I9LN01 1.12e-34 141 24 15 577 2 LAF3 Protein LONG AFTER FAR-RED 3 Arabidopsis thaliana
O34355 3.67e-30 127 24 17 574 3 ytcJ Putative amidohydrolase YtcJ Bacillus subtilis (strain 168)
Q06555 1.81e-27 119 24 12 434 3 aepA Exoenzymes regulatory protein AepA Pectobacterium carotovorum subsp. carotovorum
B0K2W0 9.29e-06 52 37 2 87 3 mtaD 5-methylthioadenosine/S-adenosylhomocysteine deaminase Thermoanaerobacter sp. (strain X514)
B0K8R8 9.29e-06 52 37 2 87 3 mtaD 5-methylthioadenosine/S-adenosylhomocysteine deaminase Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E)
Q7SXK5 2.55e-05 50 38 3 84 2 amdhd1 Probable imidazolonepropionase Danio rerio
Q8R9L4 4.61e-05 49 34 2 89 3 mtaD 5-methylthioadenosine/S-adenosylhomocysteine deaminase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
A7RX26 7.01e-05 49 37 3 89 3 amdhd1 Probable imidazolonepropionase Nematostella vectensis
A0LKV6 0.000127 48 55 0 40 3 hutI Imidazolonepropionase Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Q01W05 0.000264 47 26 1 105 3 hutI Imidazolonepropionase Solibacter usitatus (strain Ellin6076)
Q73RN8 0.000285 47 36 5 97 3 hutI Imidazolonepropionase Treponema denticola (strain ATCC 35405 / DSM 14222 / CIP 103919 / JCM 8153 / KCTC 15104)
Q8RFG1 0.00029 47 35 2 88 3 hutI Imidazolonepropionase Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q55CY3 0.000392 47 35 2 94 3 amdhd1 Probable imidazolonepropionase Dictyostelium discoideum
Q12XX8 0.000433 47 32 1 67 3 ade Adenine deaminase Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M)
C5C8I6 0.000775 45 34 2 90 3 hutI Imidazolonepropionase Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / CCM 169 / CCUG 5858 / IAM 1056 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)
Q6MJP9 0.000877 45 34 5 106 3 hutI Imidazolonepropionase Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03130
Feature type CDS
Gene -
Product amidohydrolase
Location 689745 - 691445 (strand: -1)
Length 1701 (nucleotides) / 566 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1171
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07969 Amidohydrolase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1574 General function prediction only (R) R Predicted amidohydrolase YtcJ

Protein Sequence

MTFQIADTLYYNGLIYTADNSNNFVEAIAVSQGIIIATGTKSNLLAYCNEKTQHIDLQKKMVMPGIIDAHMHPFWGGATLAGCHLDYLSLTIDEILSRIQRYLDADPIDSDTAWLKVSAWYREGMQPEGIQMTRYHLDSLNTSRPILLFSSDCHSVLANSRALELLNITAETPDPPDGNIERDGDRTPIGILEDAPAMQAIDSLPPLTAEQNLQIARHVQKLLNQQGVTTIMDARVGEPQLRAFNTLREAGELTVRVENAVEITPDDVADIAAIPHAVQQAITRFSHWHQISQGAQPSVAIRHIKLFLDGVLQAPIMTARLHAPYRINVGTDETPHWQDSEHVGDLYFSPEILTPLVTEISRAGYHPHIHTVAEGAISVALDAISEMRKALPEKDIRPGLAHNELMCEKDYARFAQLNTYPFLSFQWAGVEQHNIDKDLEMLGKARCQYLETAGKFIDAGVTVAFGSDWPIDPLNEWYDFKVAMTRQKDPSQPRLDNDRNLTLIEVLRAATINAAYALDMDKQIGSLEVGKFADFIVLDRNLFEISAEDIENVRVLCTIIAGKPTI

Flanking regions ( +/- flanking 50bp)

AGTACCGAAAATTAGCCATCATCGCCAAAAAAGCTATACAAGGTAGAAGAATGACATTTCAAATTGCAGACACACTCTATTATAACGGCCTAATCTATACCGCTGATAATAGTAACAATTTCGTCGAAGCTATCGCTGTTTCCCAAGGCATTATTATTGCAACAGGCACAAAATCGAATTTACTTGCTTACTGTAATGAAAAAACACAGCATATCGATTTACAGAAGAAAATGGTGATGCCCGGCATTATTGATGCTCATATGCATCCATTTTGGGGGGGAGCCACATTAGCAGGTTGTCACCTTGATTACCTCTCCTTAACAATCGATGAAATTCTATCGCGTATCCAACGCTATCTTGATGCTGATCCCATCGATAGTGATACAGCTTGGTTGAAAGTGTCAGCATGGTATCGTGAAGGGATGCAACCGGAAGGGATACAAATGACGCGTTATCACCTTGATAGCTTAAATACGTCTCGCCCTATCTTACTTTTTTCTAGTGATTGTCATAGCGTATTAGCAAATTCCCGCGCACTAGAATTATTAAATATTACGGCTGAAACCCCCGATCCACCTGATGGCAATATTGAACGTGATGGTGATAGAACACCTATTGGTATTCTTGAAGATGCGCCAGCTATGCAGGCTATTGATAGCCTACCGCCTTTAACGGCAGAGCAAAATCTACAAATCGCACGCCATGTACAAAAGTTGCTCAATCAACAAGGGGTAACGACTATCATGGATGCACGTGTTGGTGAGCCACAATTACGTGCCTTTAATACCTTGCGAGAAGCGGGTGAATTAACGGTTCGTGTTGAGAATGCGGTTGAAATTACCCCTGATGATGTGGCTGATATTGCAGCTATTCCTCATGCTGTACAACAAGCAATAACACGATTCTCTCACTGGCATCAAATCAGTCAAGGCGCGCAACCCAGTGTCGCTATTCGCCATATTAAGCTTTTTCTTGATGGTGTATTACAAGCGCCGATTATGACAGCACGTTTACACGCTCCTTATCGTATTAATGTCGGTACGGATGAAACGCCTCATTGGCAAGATTCAGAGCATGTTGGCGATCTCTATTTTTCACCTGAAATCTTGACGCCATTAGTCACTGAGATTAGCCGTGCAGGTTATCATCCTCATATTCATACCGTCGCTGAAGGGGCTATTAGTGTCGCACTTGACGCCATTAGTGAAATGCGCAAAGCCTTGCCAGAAAAAGATATTCGCCCCGGCCTTGCGCATAACGAATTAATGTGTGAAAAAGATTATGCGCGCTTTGCCCAATTAAATACCTACCCTTTTCTCTCCTTTCAATGGGCTGGCGTAGAGCAACATAATATTGATAAAGATCTTGAAATGTTAGGCAAAGCACGTTGCCAATATCTAGAAACCGCCGGTAAATTTATTGATGCGGGAGTGACTGTCGCATTTGGCAGTGATTGGCCGATTGATCCATTAAATGAGTGGTATGACTTTAAAGTTGCCATGACTCGACAAAAAGATCCCTCTCAGCCACGTTTAGATAATGATCGCAATCTCACCTTAATCGAAGTATTACGAGCCGCCACCATTAATGCCGCTTATGCACTAGATATGGATAAACAGATTGGTTCATTAGAAGTAGGGAAATTCGCCGATTTTATTGTCTTAGATAGAAACTTGTTTGAAATATCGGCAGAAGATATTGAAAATGTCAGGGTATTGTGTACGATAATTGCGGGGAAACCCACAATTTAGCTGAATAACATAATTAATAAACCCGCACTCAGCGGGTTTATTTTTGCCAT