COG1574


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1574, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 12 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Predicted amidohydrolase YtcJ
Function(s) descr. General function prediction only (R)

Occurence in the database

COG1574 is associated with 12 different proteins (see tab "Protein list" and "Profile")
The 12 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3191 FBDBKF_01570 3881 5749 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S1
1 group_1171 FBDBKF_06740 10085 11806 -1 ytcJ putative amidohydrolase YtcJ Morganella morganii S1
2 group_3191 EHELCC_02040 391701 393569 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S2
3 group_1171 EHELCC_04230 174380 176101 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S2
4 group_3191 NLDBIP_01420 286567 288435 -1 ytcJ putative amidohydrolase YtcJ Morganella morganii S4
5 group_1171 NLDBIP_04230 174176 175897 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S4
6 group_3191 LHKJJB_00615 104250 106118 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S3
7 group_1171 LHKJJB_10060 174290 176011 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S3
8 group_3191 HKOGLL_00655 109761 111629 1 ytcJ putative amidohydrolase YtcJ Morganella morganii S5
9 group_1171 HKOGLL_08915 15041 16762 -1 ytcJ putative amidohydrolase YtcJ Morganella morganii S5
10 group_1171 F4V73_RS00890 187109 188830 -1 amidohydrolase Morganella psychrotolerans
11 group_1171 PMI_RS03130 689745 691445 -1 amidohydrolase Proteus mirabilis HI4320