Homologs in group_4362

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4362

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4362

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P54956 1.43e-42 159 29 13 407 1 yxeQ Uncharacterized protein YxeQ Bacillus subtilis (strain 168)
P54987 1.41e-32 132 26 16 476 1 Acod1 Cis-aconitate decarboxylase Mus musculus
A6NK06 2.29e-31 129 26 13 466 1 ACOD1 Cis-aconitate decarboxylase Homo sapiens
Q2TXG0 1.62e-29 123 23 11 463 3 oryM Cis-aconitate decarboxylase-like protein oryM Aspergillus oryzae (strain ATCC 42149 / RIB 40)
B3IUN8 3.59e-25 111 23 14 480 1 cad1 Cis-aconitate decarboxylase Aspergillus terreus
Q0C8L3 4.1e-25 111 22 12 476 1 cad1 Cis-aconitate decarboxylase Aspergillus terreus (strain NIH 2624 / FGSC A1156)
O06582 3.41e-05 50 21 15 453 1 prpD 2-methylcitrate dehydratase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
H8F0D6 3.9e-05 49 21 14 453 1 ERDMAN_1266 2-methylcitrate dehydratase Mycobacterium tuberculosis (strain ATCC 35801 / TMC 107 / Erdman)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03095
Feature type CDS
Gene -
Product MmgE/PrpD family protein
Location 681765 - 683144 (strand: 1)
Length 1380 (nucleotides) / 459 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4362
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF03972 MmgE/PrpD N-terminal domain
PF19305 MmgE/PrpD C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2079 Carbohydrate transport and metabolism (G) G 2-methylcitrate dehydratase PrpD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K17724 aconitate decarboxylase [EC:4.1.1.6] C5-Branched dibasic acid metabolism
Metabolic pathways		 -

Protein Sequence

MTLSQHVANFITTTTFSQLPTQLIARAKLHLLDTLGVALAGSTQSSSKQGRHGITLLPDSQGKIPIWGSMQTANTTAAALANGIAAHALDFDDTHTDSITHGSAVLTPIAFALGETLNASNEEILTAWVIGWEVAARVGLASHSGFHQRGFHATAIAGIFGATACAASLLKLTSQQAVNALGLTASQAAGIAEYLTNSSSAKCFHAGWAAQSGIIAASLAKGGMTGPETIFEGRYSIYHTHGISEQAIPEQVAQGLGEQWEFLNVSIKPYPVCHFAHATVDCGRRLLKRGISAEEIEQVECVIDPVAAALICEPLETKWAPKTAYGAKFSLPWLFAIGFLDNALTLSSLSAENLQRNDIQLLAKKVSYRYPSENEIPFPSYFPGLIFVRLKNGQQLTERIDIQYGNPENPMVDTDVIAKFYDNAKCVMKKTQADQLIENIMNFENIPISLLTQLLRVEA

Flanking regions ( +/- flanking 50bp)

AAAAAGCCAGTGATAACTGGCTTTGTTATTATCAGCATTGAGGTATTTATATGACATTGAGTCAGCATGTAGCTAATTTTATTACTACAACGACATTTTCACAGCTTCCAACGCAACTGATAGCTCGAGCCAAATTACATTTATTAGATACATTAGGTGTAGCACTTGCAGGGAGTACACAATCTAGCTCGAAACAAGGACGTCATGGGATTACTCTTTTACCCGATAGCCAAGGTAAGATCCCCATTTGGGGAAGTATGCAGACAGCTAATACCACTGCAGCAGCCTTAGCCAATGGTATTGCTGCACATGCATTAGATTTCGATGATACACATACTGATTCTATTACTCACGGTAGTGCTGTATTAACACCGATAGCTTTTGCGTTAGGGGAAACATTAAACGCCTCAAATGAAGAAATATTAACGGCTTGGGTTATTGGTTGGGAAGTTGCTGCACGGGTTGGTTTAGCGAGTCACAGTGGTTTCCATCAACGTGGATTTCATGCAACGGCGATTGCTGGGATCTTCGGTGCAACAGCATGTGCGGCTTCATTATTAAAACTTACGTCACAGCAGGCGGTAAATGCGTTAGGACTAACGGCAAGTCAAGCAGCGGGTATCGCTGAATATCTGACTAATAGCTCATCGGCAAAATGTTTTCATGCCGGATGGGCCGCTCAATCCGGTATTATTGCAGCCTCGTTAGCTAAAGGGGGAATGACTGGGCCTGAGACAATATTTGAAGGGCGATACAGTATTTATCATACTCATGGGATCAGTGAGCAAGCGATCCCTGAACAAGTTGCACAAGGATTAGGTGAACAATGGGAGTTTTTAAATGTTTCAATAAAACCTTATCCGGTTTGCCATTTTGCTCATGCTACTGTTGATTGTGGACGTCGTTTACTTAAAAGAGGGATCAGTGCGGAAGAAATTGAACAAGTAGAATGTGTGATTGATCCAGTTGCTGCTGCATTAATTTGTGAGCCACTCGAAACAAAATGGGCGCCAAAAACAGCTTATGGGGCAAAATTTAGCTTACCTTGGTTATTTGCTATTGGTTTTTTAGATAATGCGTTAACTTTATCATCGCTTTCAGCGGAAAACTTACAGCGTAACGATATCCAACTATTGGCGAAAAAAGTGAGCTATCGTTATCCATCAGAAAATGAAATTCCCTTTCCGAGCTATTTTCCTGGATTAATCTTTGTTAGATTGAAAAATGGGCAACAATTAACTGAAAGGATCGATATTCAGTATGGTAACCCTGAAAATCCGATGGTTGATACGGATGTAATAGCGAAGTTTTATGATAATGCCAAGTGTGTAATGAAAAAGACACAAGCTGATCAACTGATTGAAAATATAATGAATTTTGAAAATATACCTATTTCATTACTTACACAATTATTACGGGTAGAGGCATAACTCTTTTATCTGCATCCACAGGGACAAGATAATGAATCTGATACCTTTTG