Homologs in group_1504

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09730 FBDBKF_09730 67.6 Morganella morganii S1 cpoB cell division protein CpoB
EHELCC_04530 EHELCC_04530 67.6 Morganella morganii S2 cpoB cell division protein CpoB
NLDBIP_04530 NLDBIP_04530 67.6 Morganella morganii S4 cpoB cell division protein CpoB
LHKJJB_14100 LHKJJB_14100 67.6 Morganella morganii S3 cpoB cell division protein CpoB
HKOGLL_12435 HKOGLL_12435 67.6 Morganella morganii S5 cpoB cell division protein CpoB
F4V73_RS00610 F4V73_RS00610 67.2 Morganella psychrotolerans cpoB cell division protein CpoB

Distribution of the homologs in the orthogroup group_1504

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1504

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45955 8.83e-85 256 58 1 261 1 cpoB Cell division coordinator CpoB Escherichia coli (strain K12)
P0A131 7.17e-29 113 36 4 196 3 cpoB Cell division coordinator CpoB Pseudomonas putida
P0A130 7.17e-29 113 36 4 196 3 cpoB Cell division coordinator CpoB Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q62018 0.000287 45 32 1 76 1 Ctr9 RNA polymerase-associated protein CTR9 homolog Mus musculus
Q6PD62 0.000287 45 32 1 76 1 CTR9 RNA polymerase-associated protein CTR9 homolog Homo sapiens
Q4QR29 0.000572 44 32 1 76 2 ctr9 RNA polymerase-associated protein CTR9 homolog Xenopus laevis
Q6DEU9 0.000667 44 32 1 76 2 ctr9 RNA polymerase-associated protein CTR9 homolog Xenopus tropicalis

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02880
Feature type CDS
Gene cpoB
Product cell division protein CpoB
Location 632416 - 633189 (strand: 1)
Length 774 (nucleotides) / 257 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1504
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13174 Tetratricopeptide repeat
PF16331 TolA binding protein trimerisation

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1729 Cell cycle control, cell division, chromosome partitioning (D) D Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction

Protein Sequence

MNNSNFRPLLMSLLLLVGVAAPVAAIAQAPISNIGSGSTDERLAQLERISNAHSQLLTQLQQQLADSQRDIDMLRGQIQENQYQLNQVVERQRNIYQQLDSLNGGNSAPTTDEASTGGNVPSTSDTSTSSSSTGDEKADYNAAIDIVLNSKDYDKAIVALNNFIKSYPKSSYQSNAQFWLGQMYYLKGNKDQAASTFAIVVKNYPKSQKASEAFYKIGLIMQEKGQKDNAKAIYQQVVKQYPNSAGAKLAQKQLAAL

Flanking regions ( +/- flanking 50bp)

CCGCTTATGCGAAAAACCGTCGTGCAGTACTGGTTTACTAAGAGAACGGCATGAACAACAGTAACTTCAGACCTTTATTGATGAGTCTGTTGTTACTGGTTGGCGTAGCGGCTCCTGTAGCCGCTATTGCCCAAGCGCCAATCAGTAATATCGGTTCAGGCTCTACTGATGAACGACTCGCCCAACTTGAGCGTATCTCTAATGCTCATAGTCAGCTTTTGACCCAATTACAGCAACAACTCGCAGATTCTCAACGCGATATTGATATGTTGCGTGGTCAAATTCAGGAAAATCAATACCAGTTAAACCAAGTTGTAGAGCGTCAACGTAATATCTATCAACAATTAGATAGCCTAAATGGTGGCAACTCAGCACCAACAACGGATGAGGCTTCAACGGGTGGCAATGTACCTTCAACATCTGATACAAGTACGAGTTCGTCGTCAACAGGTGATGAAAAAGCCGATTATAACGCGGCAATTGATATTGTATTGAATTCAAAAGATTACGATAAGGCAATTGTTGCATTAAACAACTTTATTAAAAGTTATCCGAAGTCTAGCTATCAATCAAATGCTCAATTTTGGTTGGGGCAAATGTATTATCTAAAAGGTAATAAAGATCAGGCTGCGAGTACTTTTGCTATTGTTGTGAAAAATTATCCAAAATCTCAAAAAGCAAGTGAGGCCTTTTATAAGATAGGGCTTATTATGCAAGAGAAAGGGCAAAAGGATAATGCGAAAGCTATTTATCAACAAGTGGTTAAGCAATATCCAAACAGTGCTGGTGCAAAATTAGCACAAAAGCAGTTAGCAGCACTATAATTATTGGCCCCGTAATGTGAATGTTACATTTTCGGGGTTAACTGATTGTT