Homologs in group_1552

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09730 FBDBKF_09730 100.0 Morganella morganii S1 cpoB cell division protein CpoB
NLDBIP_04530 NLDBIP_04530 100.0 Morganella morganii S4 cpoB cell division protein CpoB
LHKJJB_14100 LHKJJB_14100 100.0 Morganella morganii S3 cpoB cell division protein CpoB
HKOGLL_12435 HKOGLL_12435 100.0 Morganella morganii S5 cpoB cell division protein CpoB
F4V73_RS00610 F4V73_RS00610 90.7 Morganella psychrotolerans cpoB cell division protein CpoB
PMI_RS02880 PMI_RS02880 67.6 Proteus mirabilis HI4320 cpoB cell division protein CpoB

Distribution of the homologs in the orthogroup group_1552

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1552

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45955 4.33e-101 298 62 1 263 1 cpoB Cell division coordinator CpoB Escherichia coli (strain K12)
P0A131 4.18e-24 100 34 4 198 3 cpoB Cell division coordinator CpoB Pseudomonas putida
P0A130 4.18e-24 100 34 4 198 3 cpoB Cell division coordinator CpoB Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_04530
Feature type CDS
Gene cpoB
Product cell division protein CpoB
Location 234657 - 235436 (strand: -1)
Length 780 (nucleotides) / 259 (amino acids)
In genomic island -

Contig

Accession ZDB_214
Length 335585 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1552
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13174 Tetratricopeptide repeat
PF13432 Tetratricopeptide repeat
PF16331 TolA binding protein trimerisation

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1729 Cell cycle control, cell division, chromosome partitioning (D) D Cell division protein CpoB, coordinates peptidoglycan biosynthesis and outer membrane constriction

Protein Sequence

MKSNFRRLMVSLSLLIGVAAPWAAIAQAPIINIGSGSTDDRLTQLERISNAHGQLLTQLQQQVMDNQRDIDMLRGQIQESQYQLNQLTERQRELFSQVDSLTGGGSASTDNTSAASGNTDSAGTAATSAPAAASKGNEKDDYNAAVNMAMNTKDYDGAISAFQSFIQSYPKSGYLPNANYWLGQMNYNKGKKDDAAAYFASVVKNWPKSQKAGESFYKVGLIMQEKGDKAKAKAIYQQVVAKYPGSSGAKLAEKKLAGL

Flanking regions ( +/- flanking 50bp)

CTGACTACGCTAAAAACCGTCGTGCTGTAATCGTATACTAAGAGATATACATGAAAAGTAACTTCAGACGCCTGATGGTGAGTCTGTCGTTATTGATAGGTGTAGCGGCCCCCTGGGCCGCTATTGCTCAGGCACCCATCATCAATATCGGCTCAGGCTCCACTGATGACCGCCTCACGCAGCTCGAGCGTATTTCTAACGCTCATGGTCAGCTATTAACCCAACTTCAGCAACAAGTCATGGACAACCAGCGCGATATCGACATGCTGCGCGGGCAAATCCAGGAAAGTCAGTACCAGCTGAATCAGTTGACAGAACGCCAACGCGAACTTTTCTCACAGGTGGATTCCCTCACCGGTGGCGGCAGTGCATCAACAGATAATACATCCGCGGCATCCGGTAATACGGACTCTGCGGGTACTGCCGCAACCTCAGCTCCTGCTGCTGCAAGTAAGGGCAATGAGAAAGATGACTATAACGCCGCGGTAAACATGGCGATGAACACCAAAGATTATGATGGTGCAATCAGCGCATTTCAGAGTTTTATCCAAAGCTATCCGAAATCCGGTTATCTTCCTAATGCCAATTACTGGTTAGGTCAGATGAACTACAACAAAGGCAAAAAAGATGACGCCGCGGCGTATTTTGCTTCTGTGGTAAAGAACTGGCCGAAATCCCAGAAAGCAGGGGAGTCCTTCTATAAAGTCGGGCTGATCATGCAGGAGAAAGGGGATAAAGCGAAAGCGAAAGCGATTTATCAGCAGGTTGTCGCAAAATATCCGGGCTCTTCCGGTGCGAAACTGGCTGAGAAAAAACTGGCTGGTTTATAACCGCCGGTTTATTTTTTTGCTCAGAGTATAGCCCCGACCGGAGAGTTTTT